Dennis Sandris Nielsen

Dennis Sandris Nielsen

Professor

ORCID: 0000-0001-8121-1114

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  1. Published

    A traditional Sudanese fermented camel's milk product, Gariss, as a habitat of Streptococcus infantarius subsp. infantarius

    Abdelgadir, W., Nielsen, Dennis Sandris, Hamad, S. & Jakobsen, M., 2008, In: International Journal of Food Microbiology. 127, 3, p. 215-219 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Ghanaian cocoa bean fermentation characterized by spectroscopic and chromatographic methods and chemometrics

    Aculey, P. C., Snitkjær, P., Owusu, M., Bassompierre, M. B. R., Takrama, J., Nørgaard, L., Petersen, Mikael Agerlin & Nielsen, Dennis Sandris, 2010, In: Journal of Food Science. 75, 6, p. S300-S307 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Genotypic and technological characterization of lactic acid bacteria from indigenous fermented African foods

    Adimpong, D. B., Nielsen, Dennis Sandris, Sørensen, K. I., Derkx, P. M. F. & Jespersen, Lene, Sep 2010. 1 p.

    Research output: Contribution to conference › Poster › Research

  4. Published

    Genotypic and technological characterization of Lactic acid bacteria from African fermented foods

    Adimpong, D. B., Nielsen, Dennis Sandris, Sørensen, K. I., Derkx, P. M. F. & Jespersen, Lene, Aug 2010, 22nd International ICFMH Symposium Food Micro 2010. Copenhagen, 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  5. Published

    Draft whole-genome sequence of Bacillus sonorensis strain L12, a source of nonribosomal lipopeptides

    Adimpong, D. B., Sørensen, K. I., Nielsen, Dennis Sandris, Thorsen, L., Rasmussen, T. B., Derkx, P. M. F. & Jespersen, Lene, 2013, In: Genome Announcements. 1, 2, 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Comparative genome sequences analysis of Bacillus sonorensis 112 isolated from a primary starter used for production of Sudanese traditional bread, Gergoush, and B. licheniformis DSM13T

    Adimpong, D. B., Sørensen, K. I., Nielsen, Dennis Sandris, Rasmussen, T. B., Thorsen, L., Derkx, P. M. F. & Jespersen, Lene, 2012, Global issues in food microbiology: abstract book. p. 580 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  7. Published

    Genotypic characterization and safety assessment of lactic acid bacteria from indigenous African fermented food products

    Adimpong, D. B., Nielsen, Dennis Sandris, Sørensen, K. I., Derkx, P. M. F. & Jespersen, Lene, 2012, In: B M C Microbiology. 12, 75, 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Antimicrobial susceptibility of Bacillus strains isolated from primary starters for African traditional bread production and characterization of the bacitracin operon and bacitracin biosynthesis

    Adimpong, D. B., Sørensen, K. I., Thorsen, L., Stuer-Lauridsen, B., Abdelgadir, W. S., Nielsen, Dennis Sandris, Derkx, P. M. F. & Jespersen, Lene, 2012, In: Applied and Environmental Microbiology. 78, 22, p. 7903-7914 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Lactobacillus delbrueckii subsp. jakobsenii subsp. nov., isolated from dolo wort, an alcoholic fermented beverage in Burkina Faso

    Adimpong, D. B., Nielsen, Dennis Sandris, Sørensen, K. I., Vogensen, Finn Kvist, Sawadogo-Lingani, H., Derkx, P. M. F. & Jespersen, Lene, 2013, In: International Journal of Systematic and Evolutionary Microbiology. 63, 11, p. 3720-3726 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Phenotypic determination of antibiotic susceptibility profiles of lactic acid bacteria from indigenous African fermented food products

    Adimpong, D. B., Nielsen, Dennis Sandris, Sørensen, K. I., Derkx, P. M. F. & Jespersen, Lene, 2011. 1 p.

    Research output: Contribution to conference › Poster › Research

  11. Published

    Biodiversity of aerobic endospore-forming bacterial species occurring in Yanyanku and Ikpiru, fermented seeds of Hibiscus sabdariffa used to produce food condiments in Benin

    Agbobatinkpo, P. B., Thorsen, L., Nielsen, Dennis Sandris, Azokpota, P., Akissoe, N., Hounhouigan, J. D. & Jakobsen, M., 2013, In: International Journal of Food Microbiology. 163, 2-3, p. 231-238 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    The biodiversity of aerobic endospore-forming bacterial species occurring in Yanyanku and Ikpiru, fermented seeds of Hibiscus sabdariffa

    Agbobatinkpo, P. B., Thorsen, L., Nielsen, Dennis Sandris, Azokpota, P., Akissoe, N., Hounhouigan, J. & Jakobsen, M., 3 Sep 2012. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  13. Published

    The biodiversity of aerobic endospore-forming bacterial species occurring in Yanyanku and Ikpiru, fermented seeds of Hibiscus sabdariffa

    Agbobatinkpo, P. B., Thorsen, L., Nielsen, Dennis Sandris, Azokpota, P., Akissoe, N., Hounhouigan, J. & Jakobsen, M., 2012, Global issues in food microbiology: abstract book. p. 659 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  14. Published

    Impaired skeletal muscle hypertrophy signaling and amino acid deprivation response in Apoe knockout mice with an unhealthy lipoprotein distribution

    Agergaard, J., Zillmer, M. C. F., Castro-Mejía, J. L., Mertz, K., Kot, Witold, Højfeldt, Grith Stougaard, van Hall, Gerrit, Nielsen, Dennis Sandris, Schjerling, Peter & Holm, Lars Morten, 2021, In: Scientific Reports. 11, 15 p., 16423.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Draft Genome Sequence of Streptococcus anginosus Strain CALM001, Isolated from the Gut of an Elderly Dane

    Ahmad, H. F., Schreiber, L., Marshall, I. P. G., Andersen, P. J., Castro Mejia, J. L. & Nielsen, Dennis Sandris, 2019, In: Microbiology resource announcements. 8, 24, 2 p., e00379-19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Nutrient Restriction has Limited Short-Term Effects on Gut, Immunity, and Brain Development in Preterm Pigs

    Ahnfeldt, Agnethe May, Bæk, Ole, Hui, Y., Nielsen, Charlotte Holme, Obelitz-Ryom, K., Busk-Anderson, T., Ruge, A., Holst, Jens Juul, Rudloff, S., Burrin, D., Nguyen, Duc Ninh, Nielsen, Dennis Sandris, Zachariassen, G., Bering, S. B., Thymann, Thomas & Sangild, Per Torp, 2020, In: The Journal of Nutrition. 150, 5, p. 1196-1207

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Taxonomic and molecular characterization of lactic acid bacteria and yeasts in nunu, a Ghanaian fermented milk product

    Akabanda, F., Owusu-Kwarteng, J., Tano-Debrah, K., Glover, R. L. K., Nielsen, Dennis Sandris & Jespersen, Lene, 2013, In: Food Microbiology. 34, 2, p. 277-283 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Microbiological study of Nunu, a spontaneously fermented milk of Ghana

    Akabanda, F., Tano-Debrah, K., Glover, R., Owusu-Kwarteng, J., Nielsen, Dennis Sandris & Jespersen, Lene, 2010, 22nd International ICFMH Symposium Food Micro 2010. Copenhagen, 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  19. Published

    Microbiological study of Nunu, a spontaneously fermented milk of Ghana

    Akabanda, F., Tano-Debrah, K., Glover, R., Owusu-Kwarteng, J., Nielsen, Dennis Sandris & Jespersen, Lene, Sep 2010. 1 p.

    Research output: Contribution to conference › Poster › Research

  20. Published

    Supplementation with inulin-type fructans affects gut microbiota and attenuates some of the cardiometabolic benefits of a plant-based diet in individuals with overweight or obesity

    Aldubayan, Mona Adnan Y, Mao, Xiaotian, Laursen, M. F., Pigsborg, Kristina, Christensen, Lars, Roager, Henrik Munch, Nielsen, Dennis Sandris, Hjorth, Mads Fiil & Magkos, Faidon, 2023, In: Frontiers in Nutrition. 10, 13 p., 1108088.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Dietary proanthocyanidins promote localized antioxidant responses in porcine pulmonary and gastrointestinal tissues during Ascaris suum-induced type 2 inflammation

    Andersen-Civil, A. I. S., Myhill, L. J., Büdeyri Gökgöz, Nilay, Engström, M. T., Mejer, Helena, Zhu, L., Zeller, W. E., Salminen, J. P., Krych, Lukasz, Lauridsen, C., Nielsen, Dennis Sandris, Thamsborg, Stig Milan & Williams, Andrew Richard, 2022, In: FASEB Journal. 36, 4, e22256.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Fate of CMY-2-Encoding Plasmids Introduced into the Human Fecal Microbiota by Exogenous Escherichia coli

    Anjum, M., Madsen, Jonas Stenløkke, Nesme, Joseph, Jana, B., Wiese, M., Jasinskyte, D., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Dalsgaard, Anders, Moodley, Arshnee, Bortolaia, V. & Guardabassi, Luca, 2019, In: Antimicrobial Agents and Chemotherapy. 63, 5, 13 p., e02528-18.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    A culture-independent method for studying transfer of IncI1 plasmids from wild-type Escherichia coli in complex microbial communities

    Anjum, M., Madsen, Jonas Stenløkke, Espinosa-Gongora, C., Jana, B., Wiese, M., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Moodley, Arshnee, Bortolaia, V. & Guardabassi, Luca, Sep 2018, In: Journal of Microbiological Methods. 152, p. 18-26 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Microbial Diversity and Metabolite Profile of Fermenting Millet in the Production of Hausa koko, a Ghanaian Fermented Cereal Porridge

    Atter, A., Diaz, M., Tano-Debrah, K., Kunadu, A. P., Mayer, M. J., Colquhoun, I. J., Nielsen, Dennis Sandris, Baker, D., Narbad, A. & Amoa-Awua, W., 2021, In: Frontiers in Microbiology. 12, 15 p., 681983.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Identification of the predominant microbiota during production of lait caillé, a spontaneously fermented milk product made in Burkina Faso

    Bayili, G. R., Johansen, P., Nielsen, Dennis Sandris, Sawadogo-Lingani, H., Ouédraogo, G., Diawara, B. & Jespersen, Lene, 2019, In: World journal of microbiology & biotechnology. 35, 7, 13 p., 100.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Manipulation of the gut microbiota in C57BL/6 mice changes glucose tolerancewithout affecting weight development and gut mucosal immunity

    Bech-Nielsen, G. V., Hansen, Camilla Hartmann Friis, Hufeldt, M. R., Nielsen, Dennis Sandris, Aasted, B., Vogensen, Finn Kvist, Midtvedt, T. & Hansen, Axel Kornerup, 12 Jun 2012, In: Research in Veterinary Science. 92, 3, p. 501-508 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Counteracting age-related loss of skeletal muscle mass: a clinical and ethnological trial on the role of protein supplementation and training load (CALM Intervention Study): study protocol for a randomized controlled trial

    Bechshøft, R., Reitelseder, S., Højfeldt, Grith Stougaard, Castro Mejia, J. L., Khakimov, Bekzod, Bin Ahmad, H. F., Kjær, Michael, Engelsen, Søren Balling, Laugesen, S. M. B., Rasmussen, Morten Arendt, Lassen, Aske Juul, Jensen, T., Beyer, N., Serena, A., Perez-Cueto, Federico J.A., Nielsen, Dennis Sandris, Jespersen, Astrid Pernille & Holm, L., 2016, In: Trials. 17, 17 p., 397.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    The influence of the young microbiome on inflammatory diseases - lessons from animal studies

    Bendtsen, K. M. B., Fisker, L., Hansen, Axel Kornerup, Hansen, Camilla Hartmann Friis & Nielsen, Dennis Sandris, 2015, In: Birth Defects Research. Part C: Embryo Today Reviews (Print). 105, 4, p. 278-295 18 p.

    Research output: Contribution to journal › Review › Research › peer-review

  29. Published

    Gut microbiota composition is correlated to grid floor induced stress and behavior in the BALB/c mouse

    Bendtsen, K. M. B., Krych, Lukasz, Sørensen, Dorte Bratbo, Pang, W., Nielsen, Dennis Sandris, Josefsen, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Hansen, Axel Kornerup, 2012, In: P L o S One. 7, 10, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    The gut mycobiome of elderly danes

    Bin Ahmad, H. F., Castro Mejia, J. L., Kot, W., Bechshøft, R. L., Reitelseder, S., Holm, L. & Nielsen, Dennis Sandris, 2016. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  31. Published

    Deciphering the association networks of mycobiome communities among the elderly Danes

    Bin Ahmad, H. F., Faust, K., Castro Mejia, J. L., Kot, W., Bechshøft, R., Reitelseder, S., Holm, L. & Nielsen, Dennis Sandris, 2017. 1 p.

    Research output: Contribution to conference › Poster › Research

  32. Published

    Enteral but not parenteral antibiotics enhance gut function and prevent necrotizing enterocolitis in formula-fed newborn preterm pigs

    Birck, M. M., Nguyen, Duc Ninh, Cilieborg, Malene Skovsted, Bin Shamzir Kamal, S., Nielsen, Dennis Sandris, Damborg, Peter Panduro, Olsen, John Elmerdahl, Lauridsen, C., Sangild, Per Torp & Thymann, Thomas, 2016, In: American Journal of Physiology: Gastrointestinal and Liver Physiology. 310, 5, p. G323-G333 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    The effect of Lactobacillus paracasei subsp. paracasei L. casei W8® on blood levels of triacylglycerol is independent of colonisation

    Bjerg, A. T., Sørensen, M. B., Krych, Lukasz, Hansen, Lars Hestbjerg, Astrup, A., Kristensen, M. B. & Nielsen, Dennis Sandris, 2015, In: Beneficial Microbes. 6, 3, p. 263-269 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Controlling the uncontrolled variation in the diet induced obese mouse by microbiomic characterization

    Bondarenko, V., Løkke, Cecillie Reynolds, Dobrowolski, P., Mentzel, Caroline M. Junker, Castro-Mejia, J. L., Hansen, Camilla Hartmann Friis, Sørensen, Dorte Bratbo, Nielsen, Dennis Sandris, Krych, Lukasz & Hansen, Axel Kornerup, 2022, In: Scientific Reports. 12, 12 p., 13767.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Dietary seaweed (Saccharina latissima) supplementation in pigs induces localized immunomodulatory effects and minor gut microbiota changes during intestinal helminth infection

    Bonde, C. S., Mejer, Helena, Myhill, Laura Jessica, Zhu, L., Jensen, Penille, Büdeyri Gökgöz, Nilay, Krych, Lukasz, Nielsen, Dennis Sandris, Skovgaard, K., Thamsborg, Stig Milan & Williams, Andrew Richard, 2023, In: Scientific Reports. 13, 16 p., 21931.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Fecal filtrate transplantation protects against necrotizing enterocolitis

    Brunse, Anders, Deng, Ling, Pan, X., Hui, Y., Castro Mejia, J. L., Kot, Witold, Nguyen, Duc Ninh, Secher, Jan Bojsen-Møller, Nielsen, Dennis Sandris & Thymann, Thomas, 2022, In: The ISME Journal. 16, p. 686–694

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Enteral broad-spectrum antibiotics antagonize the effect of fecal microbiota transplantation in preterm pigs

    Brunse, Anders, Offersen, Simone Margaard, Mosegaard, J. J., Deng, Ling, Damborg, Peter Panduro, Nielsen, Dennis Sandris, Sangild, Per Torp, Thymann, Thomas & Nguyen, Duc Ninh, 2021, In: Gut Microbes. 13, 1, p. 1-16 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Effect of fecal microbiota transplantation route of administration on gut colonization and host response in preterm pigs

    Brunse, Anders, Martin, L., Rasmussen, Torben Sølbeck, Christensen, Lars, Cilieborg, Malene Skovsted, Wiese, M., Khakimov, Bekzod, Pieper, R., Nielsen, Dennis Sandris, Sangild, Per Torp & Thymann, Thomas, 2019, In: ISME Journal. 13, p. 720–733

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Optimizing protocols for extraction of bacteriophages prior to metagenomic analyses of phage communities in the human gut

    Castro Mejia, J. L., Muhammed, Musemma Kedir, Kot, Witold, Neve, H., Franz, C. M. A. P., Hansen, L. H., Vogensen, Finn Kvist & Nielsen, Dennis Sandris, 2015, In: Microbiome. 3, 14 p., 64.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Treatment with a monoclonal anti-IL-12p40 antibody induces substantial gut microbiota changes in an experimental colitis model

    Castro Mejia, J. L., Jakesevic, M., Krych, Lukasz, Nielsen, Dennis Sandris, Hansen, L. H., Sondergaard, B. C., Kvist, P. H., Hansen, Axel Kornerup & Holm, T. L., 2016, In: Gastroenterology Research and Practice. 2016, 12 p., 4953120.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Gut microbiota recovery and immune response in ampicillin-treated mice

    Castro Mejia, J. L., Jakesevic, M., Fabricius, N. F., Krych, Lukasz, Nielsen, Dennis Sandris, Kot, W., Bendtsen, K. M. B., Vogensen, Finn Kvist, Hansen, Camilla Hartmann Friis & Hansen, Axel Kornerup, 2018, In: Research in Veterinary Science. 118, p. 357-364 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Physical fitness in community-dwelling older adults is linked to dietary intake, gut microbiota, and metabolomic signatures

    Castro-Mejia, J. L., Khakimov, B., Krych, L., Bülow, J., Bechshøft, R. L., Højfeldt, G., Mertz, K. H., Garne, E. S., Schacht, S. R., Ahmad, H. F., Kot, W., Hansen, L. H., Perez-Cueto, F. J. A., Lind, M. V., Lassen, A. J., Tetens, I., Jensen, T., Reitelseder, S., Jespersen, A. P., Holm, L. & 2 others, Engelsen, Søren Balling & Nielsen, Dennis Sandris, 2020, In: Aging Cell. 19, 3, 13 p., e13105.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Restitution of gut microbiota in Ugandan children administered with probiotics (Lactobacillus rhamnosus GG and Bifidobacterium animalis subsp. lactis BB-12) during treatment for severe acute malnutrition

    Castro-Mejía, J. L., O’Ferrall, S., Krych, Lukasz, O’Mahony, E., Namusoke, H., Lanyero, B., Kot, Witold, Nabukeera-Barungi, N., Michaelsen, Kim F., Mølgaard, Christian, Friis, Henrik, Grenov, Benedikte & Nielsen, Dennis Sandris, 2020, In: Gut Microbes. 11, 4, p. 855-867 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Extraction and purification of viruses from fecal samples for metagenome and morphology analyses

    Castro-Mejía, J. L., Deng, Ling, Vogensen, Finn Kvist, Reyes, A. & Nielsen, Dennis Sandris, 2018, The Human Virome: Methods and Protocols. Moya, A. & Brocal, V. P. (eds.). Humana Press, p. 49-57 9 p. (Methods in Molecular Biology, Vol. 1838).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  45. Published

    Gut Microbiome and Its Cofactors Are Linked to Lipoprotein Distribution Profiles

    Castro-Mejía, J. L., Khakimov, Bekzod, Aru, Violetta, Lind, M. V., Ahlmann, Eva Garne, Paulová, P., Tavakkoli, E., Hansen, Lars Hestbjerg, Smilde, Age Klaas, Holm, L., Engelsen, Søren Balling & Nielsen, Dennis Sandris, 2022, In: Microorganisms. 10, 11, 2156.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    High-throughput Amplicon Sequencing of Gut Microbiome Sea Cucumber in Pahang, Malaysia

    Choo, M. Y., Yusof, M. F., Kamal, S. S., Nielsen, Dennis Sandris & Ahmad, H. F., 2023, 3rd Symposium on Industrial Science and Technology, SISTEC 2021. Salim, N., Samah, N. A., Nazlan, R., Widia, M. & Sukadarin, E. H. (eds.). American Institute of Physics, 050009. (AIP Conference Proceedings, Vol. 2682).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  47. Published

    Whey protein reduces early life weight gain in mice fed a high-fat diet

    Christensen, B. T., Hellgren, L., Lykkesfeldt, Jens, Sejrsen, K., Jeamet, A., Rune, Ida, Ellekilde, M., Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2013, In: PLOS ONE. 8, 8, 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Targeted Screening of Lactic Acid Bacteria With Antibacterial Activity Toward Staphylococcus aureus Clonal Complex Type 1 Associated With Atopic Dermatitis

    Christensen, I. B., Vedel, C., Clausen, M., Kjærulff, S., Agner, Tove & Nielsen, Dennis Sandris, 2021, In: Frontiers in Microbiology. 12, 11 p., 733847.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Prevotella abundance predicts weight loss success in healthy, overweight adults consuming a whole-grain diet ad libitum: A post hoc analysis of a 6-wk randomized controlled trial

    Christensen, Lars, Vuholm, S., Roager, Henrik Munch, Nielsen, Dennis Sandris, Krych, Lukasz, Kristensen, M. B., Astrup, A. & Hjorth, Mads Fiil, 2019, In: Journal of Nutrition. 149, 12, p. 2174-2181 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    The Smallest Intestine (TSI) - a low volume in vitro model of the small intestine with increased throughput

    Cieplak, T., Wiese, M., Nielsen, S., Van De Wiele, T., van der Berg, Franciscus Winfried J & Nielsen, Dennis Sandris, 2018, In: FEMS Microbiology Letters. 365, 21, p. 1-8 fny231.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    A bacteriophage cocktail targeting Escherichia coli reduces E. coli in simulated gut conditions, while preserving a non-targeted representative commensal normal microbiota

    Cieplak, T., Soffer, N., Sulakvelidze, A. & Nielsen, Dennis Sandris, 2018, In: Gut Microbes. 9, 5, p. 391-399 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    High-Quality Draft Genome Sequence of Lactobacillus casei Strain Z11, Isolated from a Human Adult Intestinal Biopsy Sample

    Coba, M. S. M., Marshall, I. P. G., Schreiber, L. & Nielsen, Dennis Sandris, 2017, In: Genome Announcements. 5, 28, 2 p., e00634-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Bacillus amyloliquefaciens ssp. plantarum strains as potential protective starter cultures for the production of Bikalga, an alkaline fermented food

    Compaoré, C. S., Nielsen, Dennis Sandris, Sawadogo-Lingani, H., Berner, T. S., Nielsen, K. F., Adimpong, D. B., Diawara, B., Ouédraogo, G. A., Jakobsen, M. & Thorsen, L., 2013, In: Journal of Applied Microbiology. 115, 1, p. 133-146 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Co-production of surfactin and a novel bacteriocin by Bacillus subtilis subsp. subtilis H4 isolated from Bikalga, an African alkaline Hibiscus sabdariffa seedfermented condiment

    Compaoré, C. S., Nielsen, Dennis Sandris, Ouoba, L. I. I., Berner, T. S., Nielsen, K. F., Sawadogo-Lingani, H., Diawara, B., Ouédraogo, G. A., Jakobsen, M. & Thorsen, L., 2013, In: International Journal of Food Microbiology. 162, 3, p. 297-307 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Broad spectrum antimicrobial activity of Bacillus amyloliquefaciens strains isolated from traditional Bikalga, an African fermented food condiment

    Compaoré, C. S., Nielsen, Dennis Sandris, Sawadgo-Lingani, H., Berner, T. S., Nielsen, K. F., Adimpong, D. B., Diawara, B., Ouédraogo, G., Jakobsen, M. & Thorsen, L., 2012, Global issues in food microbiology: abstract book. p. 752 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  56. Published

    Influencing cocoa flavour using Pichia kluyveri and Kluyveromyces marxianus in a defined mixed starter culture for cocoa fermentation

    Crafack, M., Mikkelsen, M. B., Saerens, S., Knudsen, M., Blennow, Andreas, Lowor, S., Takrama, J., Swiegers, J. H., Petersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 2013, In: International Journal of Food Microbiology. 167, 1, p. 103-116 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Impact of starter cultures and fermentation techniques on the volatile aroma profile of chocolate

    Crafack, M., Petersen, Mikael Agerlin, Eskildsen, C. E. A., Petersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 2013. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  58. Published

    Use of pectinolytic and aromatic yeast in a mixed starter culture for cocoa fermentation with the aim of influencing the flavour profile of cocoa

    Crafack, M., Mikkelsen, M. B., Pedersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 3 Sep 2012. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  59. Published

    Altering the flavour profiles of cocoa using aromatic and pectinolytic yeasts in a mixed starter culture for cocoa fermentation

    Crafack, M., Mikkelsen, M. B., Pedersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 2012. 1 p.

    Research output: Contribution to conference › Poster › Research

  60. Published

    Impact of starter cultures and fermentation techniques on the volatile aroma and sensory profile of chocolate

    Crafack, M., Keul, H., Eskildsen, C. E. A., Petersen, Mikael Agerlin, Saerens, S., Blennow, Andreas, Skovmand-Larsen, M., Swiegers, J. H., Petersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 2014, In: Food Research International. 63, Part C, p. 306–316 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Human fecal metabolome reflects differences in body mass index, physical fitness, and blood lipoproteins in healthy older adults

    Cui, M., Trimigno, A., Castro-Mejía, J. L., Reitelseder, S., Bülow, J., Bechshøft, R. L., Nielsen, Dennis Sandris, Holm, L., Engelsen, Søren Balling & Khakimov, Bekzod, 2021, In: Metabolites. 11, 11, 16 p., 717.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Postnatal hematopoiesis and gut microbiota in NOD mice deviate from C57BL/6 mice

    Damlund, D. S. M., Metzdorff, S. B., Hasselby, Jane Preuss, Wiese, M., Lundsager, M. T., Nielsen, Dennis Sandris, Buschard, K. S., Hansen, Axel Kornerup & Frøkiær, Hanne, 2016, In: Journal of Diabetes Research. 2016, 15 p., 6321980.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Gastrointestinal toxicity during induction treatment for childhood acute lymphoblastic leukemia: the impact of the gut microbiota

    De Pietri, S., Ingham, A. C., Frandsen, T. L., Rathe, M., Krych, Lukasz, Castro-Mejía, J. L., Nielsen, Dennis Sandris, Nersting, J., Wehner, P. S., Schmiegelow, Kjeld, Hasle, H., Pamp, S. J. & Muller, Klaus, 2020, In: International Journal of Cancer. 147, 7, p. 1953-1962 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples

    Deng, Ling, Silins, R., Castro-Mejia, J. L., Kot, W., Jessen, L., Thorsen, J., Shah, S., Stokholm, Jakob, Bisgaard, H., Moineau, S. & Nielsen, Dennis Sandris, 2019, In: Viruses. 11, 7, 10 p., 667.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Escherichia coli CRISPR arrays from early life fecal samples preferentially target prophages

    Dion, M. B., Shah, S. A., Deng, Ling, Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Horvath, P., Allard, A., Nielsen, Dennis Sandris, Petit, M. A. & Moineau, S., 2024, In: The ISME Journal. 18, 1, 9 p., wrae005.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Different microbiomes associated with the copepods Acartia tonsa and Temora longicornis from the same marine environment

    Dorosz, J. N. A., Castro Mejia, J. L., Hansen, L. H., Nielsen, Dennis Sandris & Skovgaard, A., 2016, In: Aquatic Microbial Ecology. 78, 1, p. 1-9 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Reducing the variation in animal models by standardizing the gut microbiota

    Ellekilde, M., Hufeldt, M. R., Hansen, Camilla Hartmann Friis, Bech-Nielsen, G. V., Nielsen, Dennis Sandris, Vogensen, Finn Kvist & Hansen, Axel Kornerup, May 2011.

    Research output: Contribution to conference › Conference abstract for conference › Research

  68. Published

    CORRELATION BETWEEN GUT MICROBIOTA AND DEVELOPMENT OF GLUCOSE INTOLERANCE IN B6.V-Lepob/J LEPTIN DEFICIENT MICE

    Ellekilde, M., Hansen, Camilla Hartmann Friis, Nielsen, Dennis Sandris, Hufeldt, M. R., Vogensen, Finn Kvist & Hansen, Axel Kornerup, Apr 2011. 1 p.

    Research output: Contribution to conference › Poster › Research

  69. Published

    Characterization of the gut microbiota in leptin deficient obese mice: correlation to inflammatory and diabetic parameters

    Ellekilde, M., Krych, Lukasz, Hansen, Camilla Hartmann Friis, Hufeldt, M. R., Dahl, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Vogensen, Finn Kvist, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2014, In: Research in Veterinary Science. 96, 2, p. 241-250 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Transfer of gut microbiota from lean and obese mice to antibiotic-treated mice

    Ellekilde, M., Selfjord, E. M., Larsen, C. S., Jakesevic, M., Rune, Ida, Christensen, B. T., Vogensen, Finn Kvist, Nielsen, Dennis Sandris, Bahl, M. I., Licht, T. R., Hansen, Axel Kornerup & Hansen, Camilla Hartmann Friis, 2014, In: Scientific Reports. 4, 8 p., 5922.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Effect of inoculating C57BL/6NTac mice with different gut microbiotas on gut colonization and glucose tolerance

    Ellekilde, M., Viscardi, M., Rune, Ida, Vogensen, Finn Kvist, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 1 Nov 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  72. Published

    Good PhD pratice

    Ersbøll, A. K., Flensted-Jensen, M., Nielsen, A. B. & Nielsen, Dennis Sandris, 2005, In: Det Levende Universitet. 6, p. 3 1 p.

    Research output: Contribution to journal › Journal article › Communication

  73. Published

    Complete Genome Sequences of Three Lactiplantibacillus plantarum Strains Isolated from Traditional Iranian Raw Milk Motal Cheese

    Fatemizadeh, S. S., Krych, Lukasz, Castro-Mejía, J. L., Stefanova, Denitsa Vladimirova, Kot, Witold, Najafi, M. B. H. & Nielsen, Dennis Sandris, 2023, In: Microbiology Resource Announcements. 12, 1, 3 p., e0047922.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Sensitivity to oxazolone induced dermatitis is transferable with gut microbiota in mice

    Fisker, L., Krych, Lukasz, Engkilde, K., Nielsen, Dennis Sandris, Kot, W. P., Hansen, Camilla Hartmann Friis & Hansen, Axel Kornerup, 2017, In: Scientific Reports. 7, 11 p., 44385.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Impact of the Gram-Negative-Selective Inhibitor MAC13243 on In Vitro Simulated Gut Microbiota

    Svanberg Frisinger, Frida, Pirolo, Mattia, Ng, D. Y. K., Mao, Xiaotian, Nielsen, Dennis Sandris & Guardabassi, Luca, 2022, In: Pharmaceuticals. 15, 6, 731.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Influenza A Virus Infection Alters Gut Microbiota Composition in Juvenile Mice

    Fuglsang, E., Krych, Lukasz, Nielsen, Dennis Sandris, Frøkiær, Hanne & Reading, P. C., 2018, In: Journal of Infectious Diseases & Travel Medicine. 2, 3, 10 p., 000118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Postnatal Administration of Lactobacillus rhamnosus HN001 Ameliorates Perinatal Broad-Spectrum Antibiotic-Induced Reduction in Myelopoiesis and T Cell Activation in Mouse Pups

    Fuglsang, E., Krych, Lukasz, Lundsager, M. T., Nielsen, Dennis Sandris & Frøkiær, Hanne, Nov 2018, In: Molecular Nutrition and Food Research. 62, 22, p. 1-12 1800510.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Changes in Gut Microbiota Prior to Influenza A Virus Infection Do Not Affect Immune Responses in Pups or Juvenile Mice

    Fuglsang, E., Pizzolla, A., Krych, Lukasz, Nielsen, Dennis Sandris, Brooks, A. G., Frøkiær, Hanne & Reading, P. C., 2018, In: Frontiers in Cellular and Infection Microbiology. 8, 16 p., 319.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Kombucha beverage from green, black and rooibos teas: a comparative study looking at microbiology, chemistry and antioxidant activity

    Gaggìa, F., Baffoni, L., Galiano, M., Nielsen, Dennis Sandris, Jakobsen, Rasmus Riemer, Castro-Mejía, J. L., Bosi, S., Truzzi, F., Musumeci, F., Dinelli, G. & Di Gioia, D., 2019, In: Nutrients. 11, 1, p. 1-22 1.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Lactic Acid Bacteria: Influence on intracellular pH in Mycobacterum avium subsp. paratubercolosis

    Gaggìa, F., Siegumfeldt, Henrik, Nielsen, Dennis Sandris, Biavati, B. & Jakobsen, M., 2008, Food Micro 2008: Evolving microbial food quality and safety: Programme and Abstracts Book. p. 138 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  81. Published

    Intracellular pH of Mycobacterium avium subsp. paratuberculosis following exposure to antimicrobial compounds monitored at the single cell level

    Gaggìa, F., Nielsen, Dennis Sandris, Biavati, B. & Siegumfeldt, Henrik, 2010, In: International Journal of Food Microbiology. 141, p. S188-S192 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Environment or genetic isolation? An atypical intestinal microbiota in the Maltese honey bee Apis mellifera spp. ruttneri

    Gaggìa, F., Jakobsen, Rasmus Riemer, Alberoni, D., Baffoni, L., Cutajar, S., Mifsud, D., Nielsen, Dennis Sandris & Di Gioia, D., 2023, In: Frontiers in Microbiology. 14, 15 p., 1127717.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Mælk, mikrobiota og underernæring

    Grenov, Benedikte, Nielsen, Dennis Sandris, Mølgaard, Christian, Michaelsen, Kim F. & Friis, Henrik, 20 Aug 2021, In: Maelkeritidende. 7, p. 18 1 p.

    Research output: Contribution to journal › Journal article › Communication

  84. Published

    A prebiotic intervention study in children with autism spectrum disorders (ASDs)

    Grimaldi, R., Gibson, G. R., Vulevic, J., Giallourou, N., Castro Mejia, J. L., Hansen, L. H., Gibson, E. L., Nielsen, Dennis Sandris & Costabile, A., 2018, In: Microbiome. 6, 13 p., 133.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Development of rodents with a controlled gut microbiota and low variation

    Hansen, Axel Kornerup, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Hansen, Camilla Hartmann Friis, Ellekilde, M., Rune, Ida & Bech-Nielsen, G. V., 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  86. Published

    Why should we consider monitoring the normal flora

    Hansen, Axel Kornerup, Hufeldt, M. R., Hansen, Camilla Hartmann Friis, Ellekilde, M., Nielsen, Dennis Sandris, Aasted, B. & Vogensen, Finn Kvist, Jun 2010.

    Research output: Contribution to conference › Conference abstract for conference › Research

  87. Published

    Characterizing the gut microbiota as a way to reduce the group size in rodent studies

    Hansen, Axel Kornerup, Hansen, Camilla Hartmann Friis, Krych, Lukasz, Buschard, K. S., Lundberg, R., Ellekilde, M. & Nielsen, Dennis Sandris, 2014. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  88. Published

    The impact of the gut microbiota on rodent models

    Hansen, Axel Kornerup, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Hansen, Camilla Hartmann Friis, Ellekilde, M. & Bech-Nielsen, G. V., 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  89. Published

    Handbook of laboratory animal bacteriology

    Hansen, Axel Kornerup & Nielsen, Dennis Sandris, 2015, 2. ed. Boca Raton, USA: CRC Press. 280 p.

    Research output: Book/Report › Book › Research › peer-review

  90. Published

    A review of applied aspects of dealing with gut microbiota impact on rodent models

    Hansen, Axel Kornerup, Krych, Lukasz, Nielsen, Dennis Sandris & Hansen, Camilla Hartmann Friis, 2015, In: ILAR Journal. 56, 2, p. 250-64 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Bacterial species to be considered in quality assurance of mice and rats

    Hansen, Axel Kornerup, Nielsen, Dennis Sandris, Krych, Lukasz & Hansen, Camilla Hartmann Friis, 2019, In: Laboratory Animals. 53, 3, p. 281-291

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Impact of the gut microbiota on rodent models of human disease

    Hansen, Axel Kornerup, Hansen, Camilla Hartmann Friis, Krych, Lukasz & Nielsen, Dennis Sandris, 2014, In: World Journal of Gastroenterology. 20, 47, p. 17727-17736 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Targeting gut microbiota and barrier function with prebiotics to alleviate autoimmune manifestations in NOD mice

    Hansen, Camilla Hartmann Friis, Larsen, C. S., Petersson, H. O., Zachariassen, L. F., Vegge, A., Lauridsen, C., Kot, W., Krych, Lukasz, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2019, In: Diabetologia. 62, 9, p. 1689-1700

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Gluten-free diet reduces autoimmune diabetes mellitus in mice across multiple generations in a microbiota-independent manner

    Hansen, Camilla Hartmann Friis, Larsen, C. S., Zachariassen, L. F., Mentzel, Caroline M. Junker, Laigaard, A., Krych, Lukasz, Nielsen, Dennis Sandris, Gobbi, Alex, Haupt-Jorgensen, M., Buschard, K. & Hansen, Axel Kornerup, 2022, In: Journal of Autoimmunity. 127, 102795.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Early life treatment with vancomycin reduces diabetes incidence in NOD mice

    Hansen, Camilla Hartmann Friis, Nielsen, Dennis Sandris, Vogensen, Finn Kvist & Hansen, Axel Kornerup, Apr 2011.

    Research output: Contribution to conference › Poster › Research

  96. Published

    Mode of delivery shapes gut colonization pattern and modulates regulatory immunity in mice

    Hansen, Camilla Hartmann Friis, Andersen, L. S. F., Krych, Lukasz, Metzdorff, S. B., Hasselby, Jane Preuss, Skov, Søren, Nielsen, Dennis Sandris, Buschard, K., Hansen, Lars Hestbjerg & Hansen, Axel Kornerup, 2014, In: Journal of Immunology. 193, 3, p. 1213-1222 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Gut microbiota regulates NKG2D ligand expression on intestinal epithelial cells

    Hansen, Camilla Hartmann Friis, Holm, T. L., Krych, Lukasz, Andresen, Lars, Nielsen, Dennis Sandris, Rune, Ida, Hansen, Axel Kornerup & Skov, Søren, 2013, In: European Journal of Immunology. 43, 2, p. 447-457 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse

    Hansen, Camilla Hartmann Friis, Krych, Lukasz, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Buschard, K. & Hansen, Axel Kornerup, 2012, In: Diabetologia. 55, 8, p. 2285-2294 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Patterns of early gut colonization shape future immune responses of the host

    Hansen, Camilla Hartmann Friis, Nielsen, Dennis Sandris, Kverka, M., Zakostelska, Z., Klimesova, K., Hudcovic, T., Tlaskalova-Hogenova, H. & Hansen, Axel Kornerup, 2012, In: P L o S One. 7, 3, p. e34043 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    A maternal gluten-free diet reduces inflammation and diabetes incidence in the offspring of NOD mice

    Hansen, Camilla Hartmann Friis, Krych, Lukasz, Buschard, K., Metzdorff, S. B., Nellemann, C. L., Hansen, Lars Hestbjerg, Nielsen, Dennis Sandris, Frøkiær, Hanne, Skov, Søren & Hansen, Axel Kornerup, 2014, In: Diabetes. 63, 8, p. 2821-2832 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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