Dennis Sandris Nielsen

Dennis Sandris Nielsen

Professor

ORCID: 0000-0001-8121-1114

Publication year:
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301 - 341 out of 341Page size: 100
  1. 2022
  2. Published

    Gluten-free diet reduces autoimmune diabetes mellitus in mice across multiple generations in a microbiota-independent manner

    Hansen, Camilla Hartmann Friis, Larsen, C. S., Zachariassen, L. F., Mentzel, Caroline M. Junker, Laigaard, A., Krych, Lukasz, Nielsen, Dennis Sandris, Gobbi, Alex, Haupt-Jorgensen, M., Buschard, K. & Hansen, Axel Kornerup, 2022, In: Journal of Autoimmunity. 127, 102795.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Gut Microbiome and Its Cofactors Are Linked to Lipoprotein Distribution Profiles

    Castro-Mejía, J. L., Khakimov, Bekzod, Aru, Violetta, Lind, M. V., Ahlmann, Eva Garne, Paulová, P., Tavakkoli, E., Hansen, Lars Hestbjerg, Smilde, Age Klaas, Holm, L., Engelsen, Søren Balling & Nielsen, Dennis Sandris, 2022, In: Microorganisms. 10, 11, 2156.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Gut colonization in preterm infants supplemented with bovine colostrum in the first week of life: An explorative pilot study

    Jiang, Pingping, Muk (Mudi), Tik, Krych, Lukasz, Nielsen, Dennis Sandris, Khakimov, Bekzod, Li, Y., Juhl, S. M., Greisen, Gorm & Sangild, Per Torp, 2022, In: Journal of Parenteral and Enteral Nutrition. 46, 3, p. 592-599

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Gut microbiome and metabolome of sea cucumber (Stichopus ocellatus) as putative markers for monitoring the marine sediment pollution in Pahang, Malaysia

    Wei, S. S., Yen, C. M., Marshall, I. P. G., Hamid, H. A., Kamal, S. S., Nielsen, Dennis Sandris & Ahmad, H. F., 2022, In: Marine Pollution Bulletin. 182, 15 p., 114022.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Human blood lipoprotein predictions from 1H NMR spectra: Protocol, model performances, and cage of covariance

    Khakimov, Bekzod, Hoefsloot, H. C. J., Mobaraki, N., Aru, Violetta, Kristensen, M., Lind, M. V., Holm, L., Castro-Mejía, J. L., Nielsen, Dennis Sandris, Jacobs, D. M., Smilde, Age Klaas & Engelsen, Søren Balling, 2022, In: Analytical Chemistry. 94, 2, p. 628-636 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Impact of the Gram-Negative-Selective Inhibitor MAC13243 on In Vitro Simulated Gut Microbiota

    Svanberg Frisinger, Frida, Pirolo, Mattia, Ng, D. Y. K., Mao, Xiaotian, Nielsen, Dennis Sandris & Guardabassi, Luca, 2022, In: Pharmaceuticals. 15, 6, 731.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Influence of maternal body mass index on human milk composition and associations to infant metabolism and gut colonisation: MAINHEALTH - a study protocol for an observational birth cohort

    Overgaard Poulsen, K., Astono, J., Jakobsen, Rasmus Riemer, Uldbjerg, N., Fuglsang, J., Nielsen, Dennis Sandris & Sundekilde, U. K., 2022, In: BMJ Open. 12, 11, 10 p., e059552.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Marked gut microbiota dysbiosis and increased imidazole propionate are associated with a NASH Göttingen Minipig model

    Lützhøft, Ditte Olsen, Sinioja, T., Christoffersen, B., Jakobsen, Rasmus Riemer, Geng, Dawei, Ahmad, H. F. B., Straarup, E. M., Pedersen, K. M., Kot, Witold, Pedersen, H. D., Cirera, Susanna, Hyötyläinen, T., Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2022, In: BMC Microbiology. 22, 1, 287.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Morphological and Genetic Characterization of Eggerthella lenta Bacteriophage PMBT5

    Sprotte, S., Rasmussen, Torben Sølbeck, Cho, G., Brinks, E., Lametsch, Rene, Neve, H., Vogensen, Finn Kvist, Nielsen, Dennis Sandris & Franz, C. M. A. P., 2022, In: Viruses. 14, 8, 1598.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Parasite-Probiotic Interactions in the Gut: Bacillus sp. and Enterococcus faecium Regulate Type-2 Inflammatory Responses and Modify the Gut Microbiota of Pigs During Helminth Infection

    Myhill, L. J., Stolzenbach, S., Mejer, Helena, Krych, Lukasz, Jakobsen, S. R., Kot, Witold, Skovgaard, K., Canibe, N., Nejsum, P., Nielsen, Dennis Sandris, Thamsborg, Stig Milan & Williams, Andrew Richard, 2022, In: Frontiers in Immunology. 12, 793260.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    The phytonutrient cinnamaldehyde limits intestinal inflammation and enteric parasite infection

    Zhu, L., Andersen-Civil, A. I. S., Myhill, L. J., Thamsborg, Stig Milan, Kot, Witold, Krych, Lukasz, Nielsen, Dennis Sandris, Blanchard, A. & Williams, Andrew Richard, 2022, In: Journal of Nutritional Biochemistry. 100, 10 p., 108887.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Yogurt Benefits Bone Mineralization in Ovariectomized Rats with Concomitant Modulation of the Gut Microbiome

    He, W., Xie, Zhuqing, Wittig, N. K., Zachariassen, L. F., Andersen, A., Andersen, H. J., Birkedal, H., Nielsen, Dennis Sandris, Hansen, Axel Kornerup & Bertram, H. C., 2022, In: Molecular Nutrition and Food Research. 66, 20, 10 p., 2200174.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. 2023
  15. Published

    CRISPR-Cas provides limited phage immunity to a prevalent gut bacterium in gnotobiotic mice

    Rasmussen, Torben Sølbeck, Koefoed, A. K., Deng, Ling, Muhammed, Musemma Kedir, Rousseau, G. M., Kot, Witold, Sprotte, S., Neve, H., Franz, C. M. A. P., Hansen, Axel Kornerup, Vogensen, Finn Kvist, Moineau, S. & Nielsen, Dennis Sandris, 2023, In: ISME Journal. 17, p. 432–442

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Cesarean section induced dysbiosis promotes type 2 immunity but not oxazolone-induced dermatitis in mice

    Zachariassen, L. F., Ebert, M. B. B., Mentzel, Caroline M. Junker, Deng, Ling, Krych, Lukasz, Nielsen, Dennis Sandris, Stokholm, Jakob & Hansen, Camilla Hartmann Friis, 2023, In: Gut Microbes. 15, 2, 15 p., 2271151.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Choice of Ultrafilter Affects Recovery Rate of Bacteriophages

    Larsen, Frej Andreas Nøhr, Offersen, Simone Margaard, Li, V. R., Deng, Ling, Nielsen, Dennis Sandris & Rasmussen, Torben Sølbeck, 2023, In: Viruses. 15, 10, 12 p., 2051.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Complete Genome Sequences of Three Lactiplantibacillus plantarum Strains Isolated from Traditional Iranian Raw Milk Motal Cheese

    Fatemizadeh, S. S., Krych, Lukasz, Castro-Mejía, J. L., Stefanova, Denitsa Vladimirova, Kot, Witold, Najafi, M. B. H. & Nielsen, Dennis Sandris, 2023, In: Microbiology Resource Announcements. 12, 1, 3 p., e0047922.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Complete and Draft Genome Sequences of 52 Bacillus and Priestia Strains Isolated from West African Fermentations and 26 Reference Strains from a Public Culture Collection

    Wiedenbein, Emma Schack, Canoy, Tessa Suzanne, Hui, Y., Parkouda, C., Compaoré, C. S., Ametefe, E., Jakobsen, M., Jespersen, Lene, Nielsen, Dennis Sandris & Roux, S. (ed.), 2023, In: Microbiology resource announcements. 12, 7, 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Dietary non-starch polysaccharides impair immunity to enteric nematode infection

    Valente, Angela Hørdum, Jensen, K. M. R., Myhill, Laura Jessica, Zhu, L., Mentzel, Caroline M. Junker, Krych, Lukasz, Simonsen, H. T., Castro-Mejía, J. L., Gobbi, Alex, Bach Knudsen, K. E., Nielsen, Dennis Sandris, Thamsborg, Stig Milan & Williams, Andrew Richard, 2023, In: BMC Biology. 21, 16 p., 138.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Dietary seaweed (Saccharina latissima) supplementation in pigs induces localized immunomodulatory effects and minor gut microbiota changes during intestinal helminth infection

    Bonde, C. S., Mejer, Helena, Myhill, Laura Jessica, Zhu, L., Jensen, Penille, Büdeyri Gökgöz, Nilay, Krych, Lukasz, Nielsen, Dennis Sandris, Skovgaard, K., Thamsborg, Stig Milan & Williams, Andrew Richard, 2023, In: Scientific Reports. 13, 16 p., 21931.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Effect of processing on in vitro digestibility (IVPD) of food proteins

    Orlien, Vibeke, Aalaei, K., Poojary, Mahesha Manjunatha, Nielsen, Dennis Sandris, Ahrné, Lilia & Ruiz Carrascal, Jorge, 2023, In: Critical Reviews in Food Science and Nutrition. 63, 16, p. 2790-2839

    Research output: Contribution to journal › Review › Research › peer-review

  23. Published

    Environment or genetic isolation? An atypical intestinal microbiota in the Maltese honey bee Apis mellifera spp. ruttneri

    Gaggìa, F., Jakobsen, Rasmus Riemer, Alberoni, D., Baffoni, L., Cutajar, S., Mifsud, D., Nielsen, Dennis Sandris & Di Gioia, D., 2023, In: Frontiers in Microbiology. 14, 15 p., 1127717.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Expanding known viral diversity in the healthy infant gut

    Shah, S. A., Deng, L., Thorsen, J., Pedersen, A. G., Dion, M. B., Castro-Mejía, J. L., Silins, R., Romme, F. O., Sausset, R., Jessen, L. E., Ndela, E. O., Hjelmsø, M., Rasmussen, M. A., Redgwell, T. A., Rodríguez, C. L., Vestergaard, G., Zhang, Y., Chawes, B., Bønnelykke, K., Sørensen, S. J. & 6 others, Bisgaard, H., Enault, F., Stokholm, Jakob, Moineau, S., Petit, M. A. & Nielsen, Dennis Sandris, 2023, In: Nature Microbiology. 8, p. 986–998

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Fecal virome transfer improves proliferation of commensal gut Akkermansia muciniphila and unexpectedly enhances the fertility rate in laboratory mice

    Rasmussen, Torben Sølbeck, Mentzel, Caroline M. Junker, Danielsen, M. R., Jakobsen, Rasmus Riemer, Zachariassen, L. S. F., Castro Mejia, J. L., Brunse, Anders, Hansen, Lars Hestbjerg, Hansen, Camilla Hartmann Friis, Hansen, Axel Kornerup & Nielsen, Dennis Sandris, 2023, In: Gut Microbes. 15, 1, 21 p., 2208504.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    High-throughput Amplicon Sequencing of Gut Microbiome Sea Cucumber in Pahang, Malaysia

    Choo, M. Y., Yusof, M. F., Kamal, S. S., Nielsen, Dennis Sandris & Ahmad, H. F., 2023, 3rd Symposium on Industrial Science and Technology, SISTEC 2021. Salim, N., Samah, N. A., Nazlan, R., Widia, M. & Sukadarin, E. H. (eds.). American Institute of Physics, 050009. (AIP Conference Proceedings, Vol. 2682).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  27. Published

    IDDF2023-ABS-0301 Pathogenic fungi of rhodotorula dairenensis is linked with colorectal cancer patients in malaysia

    Yunus, A., Mokhtar, N. M., Raja Ali, R. A., Kendong, S. M. A., Nielsen, Dennis Sandris & Ahmad, H. F., 2023, In: Gut. 72, p. A132 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  28. Published

    Not simply a matter of parents—Infants’ sleep-wake patterns are associated with their regularity of eating

    Mühlematter, C., Nielsen, Dennis Sandris, Castro-Mejía, J. L., Brown, S. A., Rasch, B., Wright, K. P., Walser, J. C., Schoch, S. F. & Kurth, S., 2023, In: PLoS ONE. 18, 10 , 15 p., e0291441.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Preliminary Screening of Bacterial and Fungal Communities from Spontaneous Fermentation of Durian Pulps (Tempoyak) Using High-throughput Amplicon Sequencing

    Musa, S. M., Kamal, S. S., Nielsen, Dennis Sandris & Ahmad, H. F., 2023, 3rd Symposium on Industrial Science and Technology, SISTEC 2021. Salim, N., Samah, N. A., Nazlan, R., Widia, M. & Sukadarin, E. H. (eds.). American Institute of Physics, 050010. (AIP Conference Proceedings, Vol. 2682).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  30. Published

    Reduced phosphatidylcholine level in the intestinal mucus layer of prediabetic NOD mice

    Mønsted, M. Ø., Bilgin, M., Kuzma, M., Pelantová, H., Pedersen, K., Tomášová, P., Nazmutdinova, A., Šedivá, B., Funda, D., Castro-Mejía, J. L., Holm, L. J., Nielsen, Dennis Sandris & Haupt-Jorgensen, M., 2023, In: APMIS - Journal of Pathology, Microbiology and Immunology. 131, 6, p. 237-248

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Soluble, Diferuloylated Corn Bran Glucuronoarabinoxylans Modulate the Human Gut Microbiota In Vitro

    Lin, S., Xu, X., Holck, J., Agger, J. W., Wilkens, C., Xie, Zhuqing, Khakimov, Bekzod, Nielsen, Dennis Sandris & Meyer, A. S., 2023, In: Journal of Agricultural and Food Chemistry. 71, 8, p. 3885-3897

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Supplementation with inulin-type fructans affects gut microbiota and attenuates some of the cardiometabolic benefits of a plant-based diet in individuals with overweight or obesity

    Aldubayan, Mona Adnan Y, Mao, Xiaotian, Laursen, M. F., Pigsborg, Kristina, Christensen, Lars, Roager, Henrik Munch, Nielsen, Dennis Sandris, Hjorth, Mads Fiil & Magkos, Faidon, 2023, In: Frontiers in Nutrition. 10, 13 p., 1108088.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    The impact of storage buffer and storage conditions on fecal samples for bacteriophage infectivity and metavirome analyses

    Zhai, Xichuan, Castro-Mejía, J. L., Gobbi, Alex, Aslampaloglou, A., Kot, Witold, Nielsen, Dennis Sandris & Deng, Ling, 2023, In: Microbiome. 11, 12 p., 193.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    The infant gut virome is associated with preschool asthma risk independently of bacteria

    Rodríguez, C. L., Shah, S. A., Rasmussen, Morten Arendt, Thorsen, J., Boulund, U., Pedersen, C. T., Castro-Mejía, J. L., Poulsen, Christina Egeø, Poulsen, C. S., Deng, Ling, Larsen, Frej Andreas Nøhr, Widdowson, Michael Lawrence, Zhang, Yichang, Sørensen, Søren Johannes, Moineau, S., Petit, M. A., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Nielsen, Dennis Sandris & Stokholm, Jakob, 2023, In: Nature Medicine. 30, p. 138-148 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Used Nasogastric Feeding Tubes from Neonates Contain Infant-Specific Bacterial Profiles

    Meinich Juhl, S., Angeliki Krogfelt, K., Kot, Witold, Nielsen, Dennis Sandris & Krych, Lukasz, 2023, In: Microorganisms. 11, 6, 11 p., 1365.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. 2024
  37. Published

    Escherichia coli CRISPR arrays from early life fecal samples preferentially target prophages

    Dion, M. B., Shah, S. A., Deng, Ling, Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Horvath, P., Allard, A., Nielsen, Dennis Sandris, Petit, M. A. & Moineau, S., 2024, In: The ISME Journal. 18, 1, 9 p., wrae005.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    A Stress Reduction Intervention for Lactating Mothers Alters Maternal Gut, Breast Milk, and Infant Gut Microbiomes: Data from a Randomized Controlled Trial

    Yu, J., Zhang, Y., Wells, J. C. K., Wei, Z., Bajaj-Elliott, M., Nielsen, Dennis Sandris & Fewtrell, M. S., 2024, In: Nutrients. 16, 7, 15 p., 1074.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Effects of Wholegrain Compared to Refined Grain Intake on Cardiometabolic Risk Markers, Gut Microbiota, and Gastrointestinal Symptoms in Children: A Randomized Crossover Trial

    Madsen, M. T. B., Landberg, R., Nielsen, Dennis Sandris, Zhang, Yichang, Anneberg, O. M. R., Lauritzen, Lotte & Damsgaard, Camilla Trab, 2024, In: American Journal of Clinical Nutrition. 119, 1, p. 18-28

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    High fat diet is associated with gut microbiota dysbiosis and decreased gut microbial derived metabolites related to metabolic health in young Göttingen Minipigs

    Lützhøft, Ditte Olsen, Bækgård, Cecilie, Wimborne, E., Straarup, E. M., Pedersen, K. M., Swann, J. R., Pedersen, H. D., Kristensen, K., Morgills, L., Nielsen, Dennis Sandris, Hansen, Axel Kornerup, Bracken, M. K., Cirera, Susanna & Christoffersen, B. Ø., 2024, In: PLoS ONE. 19, 3, 27 p., e0298602.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Purification and Up-Concentration of Bacteriophages and Viruses from Fecal Samples

    Larsen, Frej Andreas Nøhr, Jakobsen, Rasmus Riemer, Mao, Xiaotian, Castro-Mejia, J., Deng, Ling & Nielsen, Dennis Sandris, 2024, Bacteriophages: Methods and Protocols. Humana Press, p. 105-110 6 p. (Methods in Molecular Biology, Vol. 2738).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  42. Published

    Randomised, Placebo-Controlled Investigation of the Impact of Probiotic Consumption on Gut Microbiota Diversity and the Faecal Metabolome in Seniors

    van Zanten, G. C., Madsen, Anne Lundager, Yde, C. C., Krych, Lukasz, Yeung, N., Saarinen, M. T., Kot, Witold, Jensen, H. M., Rasmussen, Morten Arendt, Ouwehand, A. C. & Nielsen, Dennis Sandris, 2024, In: Microorganisms. 12, 4, 18 p., 796.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Synergistic activity of Limosilactobacillus reuteri KUB-AC5 and water-based plants against Salmonella challenge in a human in vitro gut model

    Mok, K., Honwichit, O., Funnuam, T., Charoensiddhi, S., Nitisinprasert, S., Nielsen, Dennis Sandris & Nakphaichit, M., 2024, In: Scientific Reports. 14, 12 p., 4730.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    The effect of in vitro simulated colonic pH gradients on microbial activity and metabolite production using common prebiotics as substrates

    Xie, Zhuqing, He, W., Gobbi, Alex, Bertram, H. C. & Nielsen, Dennis Sandris, 2024, In: BMC Microbiology. 24, 13 p., 83.

    Research output: Contribution to journal › Journal article › Research › peer-review

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