PARAFAC2×N: Coupled decomposition of multi-modal data with drift in N modes

Research output: Contribution to journalJournal articleResearchpeer-review

Standard

PARAFAC2×N : Coupled decomposition of multi-modal data with drift in N modes. / Sorochan Armstrong, Michael D.; Hinrich, Jesper Løve; de la Mata, A. Paulina; Harynuk, James J.

In: Analytica Chimica Acta, Vol. 1249, 340909, 2023.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Sorochan Armstrong, MD, Hinrich, JL, de la Mata, AP & Harynuk, JJ 2023, 'PARAFAC2×N: Coupled decomposition of multi-modal data with drift in N modes', Analytica Chimica Acta, vol. 1249, 340909. https://doi.org/10.1016/j.aca.2023.340909

APA

Sorochan Armstrong, M. D., Hinrich, J. L., de la Mata, A. P., & Harynuk, J. J. (2023). PARAFAC2×N: Coupled decomposition of multi-modal data with drift in N modes. Analytica Chimica Acta, 1249, [340909]. https://doi.org/10.1016/j.aca.2023.340909

Vancouver

Sorochan Armstrong MD, Hinrich JL, de la Mata AP, Harynuk JJ. PARAFAC2×N: Coupled decomposition of multi-modal data with drift in N modes. Analytica Chimica Acta. 2023;1249. 340909. https://doi.org/10.1016/j.aca.2023.340909

Author

Sorochan Armstrong, Michael D. ; Hinrich, Jesper Løve ; de la Mata, A. Paulina ; Harynuk, James J. / PARAFAC2×N : Coupled decomposition of multi-modal data with drift in N modes. In: Analytica Chimica Acta. 2023 ; Vol. 1249.

Bibtex

@article{afc6b43d401549b08a44caf4238386f2,
title = "PARAFAC2×N: Coupled decomposition of multi-modal data with drift in N modes",
abstract = "Analysis of GC×GC-TOFMS data for large numbers of poorly-resolved peaks, and for large numbers of samples remains an enduring problem that hinders the widespread application of the technique. For multiple samples, GC×GC-TOFMS data for specific chromatographic regions manifests as a 4th order tensor of I mass spectral acquisitions, J mass channels, K modulations, and L samples. Chromatographic drift is common along both the first-dimension (modulations), and along the second-dimension (mass spectral acquisitions), while drift along the mass channel is for all practical purposes nonexistent. A number of solutions to handling GC×GC-TOFMS data have been proposed: these involve reshaping the data to make it amenable to either 2nd order decomposition techniques based on Multivariate Curve Resolution (MCR), or 3rd order decomposition techniques such as Parallel Factor Analysis 2 (PARAFAC2). PARAFAC2 has been utilised to model chromatographic drift along one mode, which has enabled its use for robust decomposition of multiple GC-MS experiments. Although extensible, it is not straightforward to implement a PARAFAC2 model that accounts for drift along multiple modes. In this submission, we demonstrate a new approach and a general theory for modelling data with drift along multiple modes, for applications in multidimensional chromatography with multivariate detection. The proposed model captures over 99.9% of variance for a synthetic data set, presenting an extreme example of peak drift and co-elution across two modes of separation.",
keywords = "Comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry, Multi-way analysis, PARAFAC2",
author = "{Sorochan Armstrong}, {Michael D.} and Hinrich, {Jesper L{\o}ve} and {de la Mata}, {A. Paulina} and Harynuk, {James J.}",
note = "Publisher Copyright: {\textcopyright} 2023 Elsevier B.V.",
year = "2023",
doi = "10.1016/j.aca.2023.340909",
language = "English",
volume = "1249",
journal = "Analytica Chimica Acta",
issn = "0003-2670",
publisher = "Elsevier",

}

RIS

TY - JOUR

T1 - PARAFAC2×N

T2 - Coupled decomposition of multi-modal data with drift in N modes

AU - Sorochan Armstrong, Michael D.

AU - Hinrich, Jesper Løve

AU - de la Mata, A. Paulina

AU - Harynuk, James J.

N1 - Publisher Copyright: © 2023 Elsevier B.V.

PY - 2023

Y1 - 2023

N2 - Analysis of GC×GC-TOFMS data for large numbers of poorly-resolved peaks, and for large numbers of samples remains an enduring problem that hinders the widespread application of the technique. For multiple samples, GC×GC-TOFMS data for specific chromatographic regions manifests as a 4th order tensor of I mass spectral acquisitions, J mass channels, K modulations, and L samples. Chromatographic drift is common along both the first-dimension (modulations), and along the second-dimension (mass spectral acquisitions), while drift along the mass channel is for all practical purposes nonexistent. A number of solutions to handling GC×GC-TOFMS data have been proposed: these involve reshaping the data to make it amenable to either 2nd order decomposition techniques based on Multivariate Curve Resolution (MCR), or 3rd order decomposition techniques such as Parallel Factor Analysis 2 (PARAFAC2). PARAFAC2 has been utilised to model chromatographic drift along one mode, which has enabled its use for robust decomposition of multiple GC-MS experiments. Although extensible, it is not straightforward to implement a PARAFAC2 model that accounts for drift along multiple modes. In this submission, we demonstrate a new approach and a general theory for modelling data with drift along multiple modes, for applications in multidimensional chromatography with multivariate detection. The proposed model captures over 99.9% of variance for a synthetic data set, presenting an extreme example of peak drift and co-elution across two modes of separation.

AB - Analysis of GC×GC-TOFMS data for large numbers of poorly-resolved peaks, and for large numbers of samples remains an enduring problem that hinders the widespread application of the technique. For multiple samples, GC×GC-TOFMS data for specific chromatographic regions manifests as a 4th order tensor of I mass spectral acquisitions, J mass channels, K modulations, and L samples. Chromatographic drift is common along both the first-dimension (modulations), and along the second-dimension (mass spectral acquisitions), while drift along the mass channel is for all practical purposes nonexistent. A number of solutions to handling GC×GC-TOFMS data have been proposed: these involve reshaping the data to make it amenable to either 2nd order decomposition techniques based on Multivariate Curve Resolution (MCR), or 3rd order decomposition techniques such as Parallel Factor Analysis 2 (PARAFAC2). PARAFAC2 has been utilised to model chromatographic drift along one mode, which has enabled its use for robust decomposition of multiple GC-MS experiments. Although extensible, it is not straightforward to implement a PARAFAC2 model that accounts for drift along multiple modes. In this submission, we demonstrate a new approach and a general theory for modelling data with drift along multiple modes, for applications in multidimensional chromatography with multivariate detection. The proposed model captures over 99.9% of variance for a synthetic data set, presenting an extreme example of peak drift and co-elution across two modes of separation.

KW - Comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry

KW - Multi-way analysis

KW - PARAFAC2

U2 - 10.1016/j.aca.2023.340909

DO - 10.1016/j.aca.2023.340909

M3 - Journal article

C2 - 36868765

AN - SCOPUS:85148012867

VL - 1249

JO - Analytica Chimica Acta

JF - Analytica Chimica Acta

SN - 0003-2670

M1 - 340909

ER -

ID: 339846484