- 2024
- Published
16S rRNA gene sequencing of non-lactic acid bacteria cultures from lait caillé in Burkina Faso
Bayili, G. R., Compaoré, C. S., Diawara, B., Jespersen, Lene & Sawadogo-Lingani, H., 2024, In: All Life. 17, 1, 8 p., 2309346.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Escherichia coli CRISPR arrays from early life fecal samples preferentially target prophages
Dion, M. B., Shah, S. A., Deng, Ling, Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Horvath, P., Allard, A., Nielsen, Dennis Sandris, Petit, M. A. & Moineau, S., 2024, In: The ISME Journal. 18, 1, 9 p., wrae005.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Gently Processed Skim Milk-Derived Whey Protein Concentrate for Infant Formula: Effects on Gut Development and Immunity in Preterm Pigs
Aasmul-Olsen, Karoline, Akıllıoğlu, H. G., Christiansen, Line Iadsatian, Engholm-Keller, Kasper, Brunse, Anders, Stefanova, Denitsa Vladimirova, Bjørnshave, A., Bechshøft, M. R., Skovgaard, K., Thymann, Thomas, Sangild, Per Torp, Lund, Marianne N. & Bering, S. B., 2024, In: Molecular Nutrition and Food Research. 68, 6, 2300458.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Stress Reduction Intervention for Lactating Mothers Alters Maternal Gut, Breast Milk, and Infant Gut Microbiomes: Data from a Randomized Controlled Trial
Yu, J., Zhang, Y., Wells, J. C. K., Wei, Z., Bajaj-Elliott, M., Nielsen, Dennis Sandris & Fewtrell, M. S., 2024, In: Nutrients. 16, 7, 15 p., 1074.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analyzing postprandial metabolomics data using multiway models: a simulation study
Li, L., Yan, S., Bakker, B. M., Hoefsloot, H., Chawes, Bo Lund Krogsgaard, Horner, David Lyle George, Rasmussen, Morten Arendt, Smilde, Age Klaas & Acar, E., 2024, In: BMC Bioinformatics. 25, 22 p., 94.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacterial colonisation of the airway in neonates and risk of asthma and allergy until age 18 years
Sunde, R. B., Thorsen, J., Kim, M., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2024, In: The European respiratory journal. 63, 1, 15 p., 2300471.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization and diversity of spoilage yeasts in dairy production with focus on their inhibitory potential
Geronikou, Athina, 2024, Department of Food Science, Faculty of Science, University of Copenhagen. 166 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Danish consumers’ knowledge about and willingness to buy dairy products close to the best-before-date
Melgaard, C. V., Voss, E., Hansen, M. F., Lassen, M., Hvidtfeldt, M., Pandey, Sujita, Rasmussen, Morten Arendt & Thomsen, Marianne, 2024, In: Food Frontiers. 5, 2, p. 494-507Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dimensional profiling of psychopathology in children and adolescents based on the K-SADS-PL and an analysis of the construct validity of two ADHD symptom dimensions
Hagstrøm, Julie, Nielsen, Tine, Sørensen, M. E., Aagaard, K., Rasmussen, Morten Arendt, Rosenberg, J. B., Mohammadzadeh, P., Sevelsted, A., Hernández-lorca, M., Fagerlund, Birgitte, Rydkjær, J., Pagsberg, Anne Katrine, Kaufman, J., Ebdrup, Bjørn, Bilenberg, N. & Jepsen, J. R. M., 2024, In: Nordic Journal of Psychiatry. 78, 1, p. 71-78 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effects of Wholegrain Compared to Refined Grain Intake on Cardiometabolic Risk Markers, Gut Microbiota, and Gastrointestinal Symptoms in Children: A Randomized Crossover Trial
Madsen, M. T. B., Landberg, R., Nielsen, Dennis Sandris, Zhang, Yichang, Anneberg, O. M. R., Lauritzen, Lotte & Damsgaard, Camilla Trab, 2024, In: American Journal of Clinical Nutrition. 119, 1, p. 18-28Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enhancement of pyranoanthocyanin formation in blueberry wine with non-Saccharomyces yeasts
Zhou, J., Tang, C., Zou, S., Lei, L., Wu, Y., Yang, W., Harindintwali, J. D., Zhang, J., Zeng, W., Deng, D., Zhao, M., Yu, X., Liu, X., Qiu, S. & Arneborg, Nils, 2024, In: Food Chemistry. 438, 10 p., 137956.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fish oil supplementation during pregnancy, anthropometrics, and metabolic health at age ten: A randomized clinical trial
Vinding, R. K., Sevelsted, A., Horner, D., Vahman, N., Lauritzen, Lotte, Hagen, C. P., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob & Bønnelykke, Klaus, 2024, In: American Journal of Clinical Nutrition. 119, 4, p. 960-968Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Flagellar interference with plasmid uptake in biofilms: a joint experimental and modeling study
Røder, Henriette Lyng, Christidi, E., Amador Hierro, Cristina Isabel, Music, S., Olesen, Asmus Kalckar, Svensson, B., Madsen, Jonas Stenløkke, Herschend, J., Kreft, J. & Burmølle, Mette, 2024, In: Applied and Environmental Microbiology. 90, 1, 15 p., e01510-23.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High fat diet is associated with gut microbiota dysbiosis and decreased gut microbial derived metabolites related to metabolic health in young Göttingen Minipigs
Lützhøft, Ditte Olsen, Bækgård, Cecilie, Wimborne, E., Straarup, E. M., Pedersen, K. M., Swann, J. R., Pedersen, H. D., Kristensen, K., Morgills, L., Nielsen, Dennis Sandris, Hansen, Axel Kornerup, Bracken, M. K., Cirera, Susanna & Christoffersen, B. Ø., 2024, In: PLoS ONE. 19, 3, 27 p., e0298602.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-dose vitamin D3 supplementation in pregnancy and risk of neurodevelopmental disorders in the children at age 10: A randomized clinical trial
Aagaard, K., Jepsen, J. R. M., Sevelsted, A., Horner, D., Vinding, R., Rosenberg, J. B., Brustad, N., Eliasen, A., Mohammadzadeh, P., Følsgaard, N., Hernández-lorca, M., Fagerlund, Birgitte, Glenthøj, Birte Yding, Rasmussen, Morten Arendt, Bilenberg, N., Stokholm, Jakob, Bønnelykke, Klaus, Ebdrup, Bjørn & Chawes, Bo Lund Krogsgaard, 2024, In: The American Journal of Clinical Nutrition. 119, 2, p. 362-370 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interspecific interactions facilitate keystone species in a multispecies biofilm that promotes plant growth
Yang, Nan, Røder, Henriette Lyng, Wicaksono, W. A., Wassermann, B., Russel, J., Li, Xuan Ji, Nesme, Joseph, Berg, G., Sørensen, Søren Johannes & Burmølle, Mette, 2024, In: The ISME Journal. 18, 1, 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Key risk factors of asthma-like symptoms are mediated through infection burden in early childhood
Kyvsgaard, J. N., Brustad, N., Hesselberg, L. M., Vahman, N., Thorsen, J., Schoos, A. M. M., Bønnelykke, K., Stokholm, Jakob & Chawes, B. L., 2024, In: Journal of Allergy and Clinical Immunology. 153, 3, p. 684-694 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Maternal Diet Associates with Offspring Bone Mineralization, Fracture Risk and Enamel Defects in Childhood and Influences the Prenatal Effect of High-Dose Vitamin D Supplementation
Kim, M., Nørrisgaard, P. E., Vahman, N., Cexus, O. N. F., Townsend, P. A., Stokholm, Jakob, Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard & Brustad, N., 2024, In: Nutrients. 16, 3, 16 p., 405.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metabolic maturation in the infant urine during the first 3 months of life
Astono, J., Poulsen, K. O., Larsen, R. A., Jessen, E. V., Sand, C. B., Rasmussen, Morten Arendt & Sundekilde, U. K., 2024, In: Scientific Reports. 14, 11 p., 5697.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Purification and Up-Concentration of Bacteriophages and Viruses from Fecal Samples
Larsen, Frej Andreas Nøhr, Jakobsen, Rasmus Riemer, Mao, Xiaotian, Castro-Mejia, J., Deng, Ling & Nielsen, Dennis Sandris, 2024, Bacteriophages: Methods and Protocols. Humana Press, p. 105-110 6 p. (Methods in Molecular Biology, Vol. 2738).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Randomised, Placebo-Controlled Investigation of the Impact of Probiotic Consumption on Gut Microbiota Diversity and the Faecal Metabolome in Seniors
van Zanten, G. C., Madsen, Anne Lundager, Yde, C. C., Krych, Lukasz, Yeung, N., Saarinen, M. T., Kot, Witold, Jensen, H. M., Rasmussen, Morten Arendt, Ouwehand, A. C. & Nielsen, Dennis Sandris, 2024, In: Microorganisms. 12, 4, 18 p., 796.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Revised whole genome and DNA methylome of Mycobacterium marinum type strain ATCC 927T
Savijoki, K., Deptula, Paulina, Roberts, R. J., Hammarén, M., Yli-Kauhaluoma, J., Varmanen, P. & Parikka, M., 2024, In: Microbiology resource announcements. 13, 4, 5 p., e0101623.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
Supplementation of lactobacillus-fermented rapeseed meal in broiler diet reduces Campylobacter jejuni cecal colonization and limits the l-tryptophan and l-histidine biosynthesis pathways
Khattak, F., Galgano, S., Pedersen, N. R., Hui, Y., Matthiesen, R. & Houdijk, J., 2024, (E-pub ahead of print) In: Journal of the Science of Food and Agriculture.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synergistic activity of Limosilactobacillus reuteri KUB-AC5 and water-based plants against Salmonella challenge in a human in vitro gut model
Mok, K., Honwichit, O., Funnuam, T., Charoensiddhi, S., Nitisinprasert, S., Nielsen, Dennis Sandris & Nakphaichit, M., 2024, In: Scientific Reports. 14, 12 p., 4730.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The dynamics of phage predation on a microcolony
Eriksen, R. S., Larsen, Frej Andreas Nøhr, Svenningsen, Sine Lo, Sneppen, Kim & Mitarai, Namiko, 2024, In: Biophysical Journal. 123, 2, p. 147-156 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of in vitro simulated colonic pH gradients on microbial activity and metabolite production using common prebiotics as substrates
Xie, Zhuqing, He, W., Gobbi, Alex, Bertram, H. C. & Nielsen, Dennis Sandris, 2024, In: BMC Microbiology. 24, 13 p., 83.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The impact of lager brewing yeasts on flavor stability of pilot-scale beer during storage
Murmann, A. N., Bevilacqua, Marta, Danielsen, Bente Pia, Jansson, T., Engholm-Keller, Kasper, Poojary, Mahesha Manjunatha, Arneborg, Nils & Lund, Marianne N., 2024, In: European Food Research and Technology. 250, p. 715-725Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tracking alternative versions of the galactose gene network in the genus Saccharomyces and their expansion after domestication
Pontes, A., Paraíso, F., Liu, Y., Limtong, S., Jindamorakot, S., Jespersen, Lene, Gonçalves, C., Rosa, C. A., Tsai, I. J., Rokas, A., Hittinger, C. T., Gonçalves, P. & Sampaio, J. P., 2024, In: iScience. 27, 2, 17 p., 108987.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Understanding bacterial surface and adhesion properties and the implications for Pickering stabilization of colloidal structures
Jiang, X., Whitehead, K. A., Arneborg, Nils, Fang, Y. & Risbo, Jens, 2024, In: Current Opinion in Colloid & Interface Science. 69, 15 p., 101767.Research output: Contribution to journal › Review › Research › peer-review
- Published
Vertical Metabolome Transfer from Mother to Child: An Explainable Machine Learning Method for Detecting Metabolomic Heritability
Lovrić, M., Horner, D., Chen, L., Brustad, N., Schoos, Ann-Marie Malby, Lasky-Su, J., Chawes, Bo Lund Krogsgaard & Rasmussen, Morten Arendt, 2024, In: Metabolites. 14, 3, 15 p., 136.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Wine Yeast as Potential Biological Control Agent Against Downy Mildew of Grapevine (Plasmopara viticola)
Behrendt, R. A., Toldam-Andersen, Torben, Arneborg, Nils, Collinge, David B. & Jensen, Birgit, 2024, Proceedings of the 21st International Conference on Organic Fruit- Growing. p. 51-57 7 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- 2023
- Published
25-hydroxyvitamin D and risk of atopic diseases and infections in early childhood
Brustad, N., Kim, M., Skov, F., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus & Chawes, Bo Lund Krogsgaard, 2023, In: Allergy: European Journal of Allergy and Clinical Immunology. 78, 10, p. 2770-2773Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Yarrowia lipolytica - a Potential Candidate for the production of Sour Beer and other Beverages
Sørensen, Anders Bagger, 2023, Department of Food Science, Faculty of Science, University of Copenhagen. 112 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Age-related effects on the modulation of gut microbiota by pectins and their derivatives: an in vitro study
Gu, Fangjie, Larsen, Nadja, Pascale, N., Petersen, S. A., Khakimov, Bekzod, Respondek, F. & Jespersen, Lene, 2023, In: Frontiers in Microbiology. 14, 14 p., 1207837.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Alterations of NMR-Based Lipoprotein Profile Distinguish Unstable Angina Patients with Different Severity of Coronary Lesions
Ye, Y., Fan, J., Chen, Z., Li, X., Wu, M., Liu, W., Zhou, S., Rasmussen, Morten Arendt, Engelsen, Søren Balling, Chen, Y., Khakimov, Bekzod & Xia, M., 2023, In: Metabolites. 13, 2, 19 p., 273.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Antifouling potential of enzymes applied to reverse osmosis membranes
Khani, M., Hansen, Mads Frederik, Knoechel, Susanne, Rasekh, B., Ghasemipanah, K., Zamir, S. M., Nosrati, M. & Burmølle, Mette, 2023, In: Biofilm. 5, 9 p., 100119.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Atopic and non-atopic effects of fish oil supplementation during pregnancy
Bisgaard, H., Mikkelsen, M., Rasmussen, Morten Arendt, Sevelsted, A., Schoos, Ann-Marie Malby, Brustad, N., Eliasen, A. U., Thorsen, J., Chawes, Bo Lund Krogsgaard, Gürdeniz, G., Morin, A., Stark, K., Stokholm, Jakob, Ober, C., Pedersen, C. E. T. & Bønnelykke, Klaus, 2023, In: Thorax. 78, 12, p. 1168–1174 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacterial community development and diversity during the first year of production in a new salmon processing plant
Thomassen, G. M. B., Krych, Lukasz, Knoechel, Susanne & Mehli, L., 2023, In: Food Microbiology. 109, 10 p., 104138.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bioprotection Potential of Lacticaseibacillus rhamnosus LRH01 and Lactiplantibacillus plantarum LP01 against Spoilage-Associated Penicillium Strains in Yoghurt
Shi, C. & Knoechel, Susanne, 2023, In: Molecules. 28, 21, 16 p., 7397.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
COVID-19 lockdown, genetic ADHD susceptibility, and mental health in 10- year-old children
Hernández-lorca, M., Sevelsted, A., Jepsen, J. R. M., Pedersen, C. T., Rosenberg, J. B., Mohammadzadeh, P., Rasmussen, Morten Arendt, Sørensen, M. E., Bilenberg, N., Glenthøj, Birte Yding, Fagerlund, Birgitte, Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Vinding, R. K., Ebdrup, Bjørn & Bønnelykke, Klaus, 2023, In: Psychiatry Research. 329, 9 p., 115481.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CRISPR-Cas provides limited phage immunity to a prevalent gut bacterium in gnotobiotic mice
Rasmussen, Torben Sølbeck, Koefoed, A. K., Deng, Ling, Muhammed, Musemma Kedir, Rousseau, G. M., Kot, Witold, Sprotte, S., Neve, H., Franz, C. M. A. P., Hansen, Axel Kornerup, Vogensen, Finn Kvist, Moineau, S. & Nielsen, Dennis Sandris, 2023, In: ISME Journal. 17, p. 432–442Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Can breastfeeding promote an antibiotic-resilient microbiome?
Stokholm, Jakob & Thorsen, Jonathan Jan Ilve, 2023, In: Med. 4, 2, p. 67-68 2 p.Research output: Contribution to journal › Comment/debate › Research
- Published
Cesarean section induced dysbiosis promotes type 2 immunity but not oxazolone-induced dermatitis in mice
Zachariassen, L. F., Ebert, M. B. B., Mentzel, Caroline M. Junker, Deng, Ling, Krych, Lukasz, Nielsen, Dennis Sandris, Stokholm, Jakob & Hansen, Camilla Hartmann Friis, 2023, In: Gut Microbes. 15, 2, 15 p., 2271151.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Changes in Muscle Mass and Strength During Follow-Up After One-Year Resistance Training Interventions in Older Adults
Mertz, K. H., Reitelseder, S., Rasmussen, Morten Arendt, Bülow, J., Højfeldt, Grith Stougaard, Jensen, M., Hjulmand, M., Lindberg, J., Kramer, M. U., Bechshøft, R. & Holm, L., 2023, In: Journal of Strength and Conditioning Research. 37, 10, p. 2064-2070 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Choice of Ultrafilter Affects Recovery Rate of Bacteriophages
Larsen, Frej Andreas Nøhr, Offersen, Simone Margaard, Li, V. R., Deng, Ling, Nielsen, Dennis Sandris & Rasmussen, Torben Sølbeck, 2023, In: Viruses. 15, 10, 12 p., 2051.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative gene analysis of beer tolerant and sensitive Lactobacillus brevis
Zhao, Y., Wu, X. & Siegumfeldt, Henrik, 2023, In: Food Science and Technology (Brazil). 43, 9 p., e126422.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complete Genome Sequences of Three Lactiplantibacillus plantarum Strains Isolated from Traditional Iranian Raw Milk Motal Cheese
Fatemizadeh, S. S., Krych, Lukasz, Castro-Mejía, J. L., Stefanova, Denitsa Vladimirova, Kot, Witold, Najafi, M. B. H. & Nielsen, Dennis Sandris, 2023, In: Microbiology Resource Announcements. 12, 1, 3 p., e0047922.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complete and Draft Genome Sequences of 52 Bacillus and Priestia Strains Isolated from West African Fermentations and 26 Reference Strains from a Public Culture Collection
Wiedenbein, Emma Schack, Canoy, Tessa Suzanne, Hui, Y., Parkouda, C., Compaoré, C. S., Ametefe, E., Jakobsen, M., Jespersen, Lene, Nielsen, Dennis Sandris & Roux, S. (ed.), 2023, In: Microbiology resource announcements. 12, 7, 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diet-associated vertically transferred metabolites and risk of asthma, allergy, eczema, and infections in early childhood
Brustad, N., Olarini, A., Kim, M., Chen, L., Ali, M., Wang, T., Cohen, A. S., Ernst, M., Hougaard, D., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus, Lasky-Su, J., Rasmussen, Morten Arendt & Chawes, Bo Lund Krogsgaard, 2023, In: Pediatric Allergy and Immunology. 34, 2, 8 p., e13917.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dietary non-starch polysaccharides impair immunity to enteric nematode infection
Valente, Angela Hørdum, Jensen, K. M. R., Myhill, Laura Jessica, Zhu, L., Mentzel, Caroline M. Junker, Krych, Lukasz, Simonsen, H. T., Castro-Mejía, J. L., Gobbi, Alex, Bach Knudsen, K. E., Nielsen, Dennis Sandris, Thamsborg, Stig Milan & Williams, Andrew Richard, 2023, In: BMC Biology. 21, 16 p., 138.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dietary seaweed (Saccharina latissima) supplementation in pigs induces localized immunomodulatory effects and minor gut microbiota changes during intestinal helminth infection
Bonde, C. S., Mejer, Helena, Myhill, Laura Jessica, Zhu, L., Jensen, Penille, Büdeyri Gökgöz, Nilay, Krych, Lukasz, Nielsen, Dennis Sandris, Skovgaard, K., Thamsborg, Stig Milan & Williams, Andrew Richard, 2023, In: Scientific Reports. 13, 16 p., 21931.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Differential responses of the gut microbiome and resistome to antibiotic exposures in infants and adults
Li, Xuan Ji, Brejnrod, A., Thorsen, J., Zachariasen, Trine, Trivedi, Urvish, Russel, J., Vestergaard, G. A., Stokholm, Jakob, Rasmussen, Morten Arendt & Sørensen, Søren Johannes, 2023, In: Nature Communications. 14, 1, 16 p., 8526.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diversity and succession of contaminating yeasts in white-brined cheese during cold storage
Geronikou, Athina, Larsen, Nadja, Lillevang, S. K. & Jespersen, Lene, 2023, In: Food Microbiology. 113, 10 p., 104266.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Draft genomes of seven isolates from Danish wastewater facilities belonging to Pseudomonas, Bacillus, Pseudochrobactrum, Brevundimonas, and Pandoraea
Maccario, Lorrie, Silva, A. F., Nesme, Joseph, Amador Hierro, Cristina Isabel, Sørensen, Søren Johannes, Cooper, V. S. & Røder, Henriette Lyng, 2023, In: Microbiology resource announcements. 12, 12, 4 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Effect of Cyberlindnera jadinii yeast on growth performance, nutrient digestibility, and gut health of broiler chickens from 1 to 34 days of age
Itani, K., Marcussen, Caroline, Rocha, S. D. C., Kathiresan, P., Mydland, L. T., Press, C. M., Xie, Zhuqing, Tauson, Anne-Helene & Øverland, M., 2023, In: Poultry Science. 102, 12, 16 p., 103127.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of fermentation process on hygiene and perceived quality of lait caillé, an ethnic milk product from Burkina Faso
Bayili, G. R., Konkobo-Yaméogo, C., Diarra, S., Diawara, B., Jespersen, Lene & Sawadogo-Lingani, H., 2023, In: Journal of Ethnic Foods. 10, 13 p., 17.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of processing on in vitro digestibility (IVPD) of food proteins
Orlien, Vibeke, Aalaei, K., Poojary, Mahesha Manjunatha, Nielsen, Dennis Sandris, Ahrné, Lilia & Ruiz Carrascal, Jorge, 2023, In: Critical Reviews in Food Science and Nutrition. 63, 16, p. 2790-2839Research output: Contribution to journal › Review › Research › peer-review
- Published
Environment or genetic isolation? An atypical intestinal microbiota in the Maltese honey bee Apis mellifera spp. ruttneri
Gaggìa, F., Jakobsen, Rasmus Riemer, Alberoni, D., Baffoni, L., Cutajar, S., Mifsud, D., Nielsen, Dennis Sandris & Di Gioia, D., 2023, In: Frontiers in Microbiology. 14, 15 p., 1127717.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evidence-based health interventions for the educational sector: Application and lessons learned from developing European food hygiene and safety teaching resources
Hann, M., Hayes, C. V., Lacroix-Hugues, V., Touboul Lundgren, P., McNulty, C., Syeda, R., Eley, C., Teixeira, P., Gennimata, D., Truninger, M., Knoechel, Susanne, Münter, L., Allison, R., Fehér, Á., Izsó, T., Kunszabó, A., Kasza, G. & Demirjian, A., 2023, In: Food Control. 143, 9 p., 109219.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exhaled nitric oxide is only an asthma-relevant biomarker among children with allergic sensitization
Sunde, R. B., Thorsen, J., Skov, F., Hesselberg, L., Kyvsgaard, J., Følsgaard, N. V., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus & Chawes, Bo Lund Krogsgaard, 2023, In: Pediatric Allergy and Immunology. 34, 11, 12 p., e14044.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Expanding known viral diversity in the healthy infant gut
Shah, S. A., Deng, L., Thorsen, J., Pedersen, A. G., Dion, M. B., Castro-Mejía, J. L., Silins, R., Romme, F. O., Sausset, R., Jessen, L. E., Ndela, E. O., Hjelmsø, M., Rasmussen, M. A., Redgwell, T. A., Rodríguez, C. L., Vestergaard, G., Zhang, Y., Chawes, B., Bønnelykke, K., Sørensen, S. J. & 6 others, , 2023, In: Nature Microbiology. 8, p. 986–998Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Familiarity and identification of everyday food odors in older adults and their influence on hedonic liking
Broge, Eva Honnens de Lichtenberg, Wendin, Karin Maria Elisabet, Rasmussen, Morten Arendt & Bredie, Wender, 2023, In: Food Quality and Preference. 103, 10 p., 104715.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fecal virome transfer improves proliferation of commensal gut Akkermansia muciniphila and unexpectedly enhances the fertility rate in laboratory mice
Rasmussen, Torben Sølbeck, Mentzel, Caroline M. Junker, Danielsen, M. R., Jakobsen, Rasmus Riemer, Zachariassen, L. S. F., Castro Mejia, J. L., Brunse, Anders, Hansen, Lars Hestbjerg, Hansen, Camilla Hartmann Friis, Hansen, Axel Kornerup & Nielsen, Dennis Sandris, 2023, In: Gut Microbes. 15, 1, 21 p., 2208504.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fungi and bacteria in the beds of rural and urban infants correlate with later risk of atopic diseases
Lehtimäki, J., Gupta, S., Hjelmsø, M., Shah, S., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Soverini, M., Li, Xuan Ji, Russel, J., Trivedi, Urvish, Brix, S., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Clinical and Experimental Allergy. 53, 12, p. 1268-1278 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genotypic variations and interspecific interactions modify gene expression and biofilm formation of Xanthomonas retroflexus
Jacquiod, S., Olsen, N. M. C., Blouin, M., Røder, Henriette Lyng & Burmølle, Mette, 2023, In: Environmental Microbiology. 25, 12, 3225-3238.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gut microbiota maturity mediates the protective effect of siblings on food allergy
Gao, Y., Stokholm, Jakob, O'Hely, M., Ponsonby, A. L., Tang, M. L. K., Ranganathan, S., Saffery, R., Harrison, L. C., Collier, F., Gray, L., Burgner, D., Molloy, J., Sly, P. D., Brix, S., Frøkiær, Hanne, Vuillermin, P. & BIS Investigator Group, B. I. G., 2023, In: Journal of Allergy and Clinical Immunology. 152, 3, p. 667-675 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Handgrip strength associates with effort-dependent lung function measures among adolescents with and without asthma
Hesselberg, L. M., Kyvsgaard, J. N., Stokholm, Jakob, Bisgaard, H., Bønnelykke, Klaus & Chawes, Bo Lund Krogsgaard, 2023, In: Scientific Reports. 13, 9 p., 13044.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-throughput Amplicon Sequencing of Gut Microbiome Sea Cucumber in Pahang, Malaysia
Choo, M. Y., Yusof, M. F., Kamal, S. S., Nielsen, Dennis Sandris & Ahmad, H. F., 2023, 3rd Symposium on Industrial Science and Technology, SISTEC 2021. Salim, N., Samah, N. A., Nazlan, R., Widia, M. & Sukadarin, E. H. (eds.). American Institute of Physics, 050009. (AIP Conference Proceedings, Vol. 2682).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Human blood plasma biomarkers of diet and weight loss among centrally obese subjects in a New Nordic Diet intervention
Trimigno, A., Khakimov, Bekzod, Rasmussen, Morten Arendt, Dragsted, Lars Ove, Larsen, T. M., Astrup, A. & Engelsen, Søren Balling, 2023, In: Frontiers in Nutrition. 10, 13 p., 1198531.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
IDDF2023-ABS-0301 Pathogenic fungi of rhodotorula dairenensis is linked with colorectal cancer patients in malaysia
Yunus, A., Mokhtar, N. M., Raja Ali, R. A., Kendong, S. M. A., Nielsen, Dennis Sandris & Ahmad, H. F., 2023, In: Gut. 72, p. A132 1 p.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Lactic acid bacteria as structural building blocks in non-fat whipping cream analogues
Jiang, X., Shekarforoush, E., Muhammed, Musemma Kedir, Whitehead, K. A., Arneborg, Nils & Risbo, Jens, 2023, In: Food Hydrocolloids. 135, 13 p., 108137.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Limited clinical role of blood eosinophil levels in early life atopic disease: A mother–child cohort study
Jensen, S. K., Melgaard, M. E., Pedersen, C. E. T., Yang, L., Vahman, N., Thyssen, Jacob Pontoppidan, Schoos, Ann-Marie Malby, Stokholm, Jakob, Bisgaard, H., Chawes, Bo Lund Krogsgaard & Bønnelykke, Klaus, 2023, In: Pediatric Allergy and Immunology. 34, 11, 10 p., e14050.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Machine-learning analysis of cross-study samples according to the gut microbiome in 12 infant cohorts
Vänni, P., Tejesvi, M. V., Paalanne, N., Aagaard, K., Ackermann, G., Camargo, C. A., Eggesbø, M., Hasegawa, K., Hoen, A. G., Karagas, M. R., Kolho, K., Laursen, M. F., Ludvigsson, J., Madan, J., Ownby, D., Stanton, C., Stokholm, Jakob & Tapiainen, T., 2023, In: mSystems. 8, 6, 20 p., e0036423.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Maternal antibiotic exposure increases total islet number and volume in the neonatal pancreas and reduces HbA1c and insulitis in adult female non-obese diabetic mice
Hansen, Camilla Hartmann Friis, Haupt-Jorgensen, M., Buschard, K., Pakkenberg, B., Krych, Lukasz & Hansen, Axel Kornerup, 2023, In: Clinical and Translational Discovery. 3, 2, 13 p., e188.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Maternal vitamin D–related metabolome and offspring risk of asthma outcomes
Kim, M., Brustad, N., Ali, M., Gürdeniz, G., Rasmussen, Morten Arendt, Litonjua, A. A., Wheelock, C. E., Kelly, R. S., Chen, Y., Prince, N., Guo, F., Zhou, X., Stokholm, Jakob, Bønnelykke, Klaus, Weiss, S. T., Bisgaard, H., Lasky-Su, J. & Chawes, Bo Lund Krogsgaard, 2023, In: Journal of Allergy and Clinical Immunology. 152, 6, p. 1646-1657.e11 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Matrix Gla Protein drives stemness and tumor initiation in ovarian cancer
Nieddu, V., Melocchi, V., Battistini, C., Franciosa, Giulia, Lupia, M., Stellato, C., Bertalot, G., Olsen, Jesper Velgaard, Colombo, N., Bianchi, F. & Cavallaro, U., 2023, In: Cell Death and Disease. 14, 3, 16 p., 220.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microalgae-derived carbon quantum dots mediated formation of metal sulfide nano-adsorbents with exceptional cadmium removal performance
Wang, Chen, Bi, L., Liu, J., Huang, B., Wang, F., Zhang, Yichang, Yao, C., Pan, G. & Song, M., 2023, In: Journal of Colloid and Interface Science. 629, Part A, p. 994-1002 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Not simply a matter of parents—Infants’ sleep-wake patterns are associated with their regularity of eating
Mühlematter, C., Nielsen, Dennis Sandris, Castro-Mejía, J. L., Brown, S. A., Rasch, B., Wright, K. P., Walser, J. C., Schoch, S. F. & Kurth, S., 2023, In: PLoS ONE. 18, 10 , 15 p., e0291441.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel Connections of Common Childhood Illnesses Based on More Than 5 Million Diary Registrations From Birth Till Age 3 Years
Nørgaard, S. K., Følsgaard, N., Vissing, N. H., Kyvsgaard, J. N., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Smilde, Age Klaas, Bønnelykke, Klaus, Bisgaard, H. & Rasmussen, Morten Arendt, 2023, In: Journal of Allergy and Clinical Immunology: In Practice. 11, 7, p. 2162-2171.e6 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oligosaccharide feed supplementation reduces plasma insulin in geldings with Equine Metabolic Syndrome
von Münchow, Alexandra, Torp Yttergren, S., Jakobsen, Rasmus Riemer, Luthersson, N., Hansen, Axel Kornerup & Lindenberg, F., 2023, In: Frontiers in Microbiomes. 2, p. 1194705 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oropharyngeal Microbiota Clusters in Children with Asthma or Wheeze Associate with Allergy, Blood Transcriptomic Immune Pathways, and Exacerbation Risk
U-BIOPRED Study Group, U. S. G., 2023, In: American Journal of Respiratory and Critical Care Medicine. 208, 2, p. 142-154 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Post-weaning diarrhea in pigs from a single Danish production herd was not associated with the pre-weaning fecal microbiota composition and diversity
Rydal, Martin Peter, Gambino, Michela, Castro-Mejia, J. L., Poulsen, Louise Ladefoged, Jørgensen, Claus Bøttcher & Nielsen, Jens Peter, 2023, In: Frontiers in Microbiology. 14, 1108197.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Preliminary Screening of Bacterial and Fungal Communities from Spontaneous Fermentation of Durian Pulps (Tempoyak) Using High-throughput Amplicon Sequencing
Musa, S. M., Kamal, S. S., Nielsen, Dennis Sandris & Ahmad, H. F., 2023, 3rd Symposium on Industrial Science and Technology, SISTEC 2021. Salim, N., Samah, N. A., Nazlan, R., Widia, M. & Sukadarin, E. H. (eds.). American Institute of Physics, 050010. (AIP Conference Proceedings, Vol. 2682).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Probing surface properties of lactic acid bacteria - Comparative modification by anhydride and aldehyde grafting
Jiang, X., Shekarforoush, E., Muhammed, Musemma Kedir, Bovet, N., Ceccato, M., Whitehead, K. A., Arneborg, Nils & Risbo, Jens, 2023, In: Surfaces and Interfaces. 38, 12 p., 102848.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Propionylated high-amylose maize starch alleviates obesity by modulating gut microbiota in high-fat diet-fed mice
Xie, Zhuqing, Yao, M., Castro-Mejía, J. L., Ma, M., Zhu, Y., Fu, X., Huang, Q. & Zhang, B., 2023, In: Journal of Functional Foods. 102, 10 p., 105447.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pulmonary toxicity and translocation of gallium phosphide nanowires to secondary organs following pulmonary exposure in mice
Berthing, T., Lard, M., Danielsen, P. H., Abariute, L., Barfod, Kenneth Klingenberg, Adolfsson, K., Knudsen, K. B., Wolff, H., Prinz, C. N. & Vogel, U., 2023, In: Journal of Nanobiotechnology. 21, 18 p., 322.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reduced phosphatidylcholine level in the intestinal mucus layer of prediabetic NOD mice
Mønsted, M. Ø., Bilgin, M., Kuzma, M., Pelantová, H., Pedersen, K., Tomášová, P., Nazmutdinova, A., Šedivá, B., Funda, D., Castro-Mejía, J. L., Holm, L. J., Nielsen, Dennis Sandris & Haupt-Jorgensen, M., 2023, In: APMIS - Journal of Pathology, Microbiology and Immunology. 131, 6, p. 237-248Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Replication Protein Rep Provides Selective Advantage to Viruses in the Presence of CRISPR-Cas Immunity
Zhang, W., Bhoobalan-Chitty, Y., Zhai, Xichuan, Hui, Y., Hansen, Lars Hestbjerg, Deng, Ling & Peng, Xu, 2023, In: CRISPR Journal. 6, 1, p. 32-42Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Risk Factors and Age-Related Patterns of Asthma-Like Symptoms in Early Childhood
Kyvsgaard, J. N., Chawes, Bo Lund Krogsgaard, Horner, David Lyle George, Hesselberg, L. M., Melgaard, M. E., Jensen, S. K., Schoos, Ann-Marie Malby, Thorsen, Jonathan Jan Ilve, Pedersen, C. E. T., Brustad, N., Bønnelykke, Klaus, Bisgaard, H. & Stokholm, Jakob, 2023, In: Journal of Allergy and Clinical Immunology: In Practice. 11, 6, p. 1773-1784.e10 22 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Seasonal and Elevational Variability in Dwarf Birch VOC Emissions in Greenlandic Tundra
Rieksta, Jolanta, Li, Tao, Davie-Martin, Cleo Lisa, Simin, Tihomir, Brogaard Aeppli, L. C., Høye, T. T., Rasmussen, Morten Arendt & Rinnan, Riikka, 2023, In: Journal of Geophysical Research: Biogeosciences. 128, 11, 17 p., e2023JG007475.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soluble, Diferuloylated Corn Bran Glucuronoarabinoxylans Modulate the Human Gut Microbiota In Vitro
Lin, S., Xu, X., Holck, J., Agger, J. W., Wilkens, C., Xie, Zhuqing, Khakimov, Bekzod, Nielsen, Dennis Sandris & Meyer, A. S., 2023, In: Journal of Agricultural and Food Chemistry. 71, 8, p. 3885-3897Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Supplementation With Fish Oil in Pregnancy Reduces Gastroenteritis in Early Childhood
Horner, David Lyle George, Hjelmsø, M. H., Thorsen, J., Rasmussen, Morten Arendt, Eliasen, A., Vinding, R. K., Schoos, Ann-Marie Malby, Brustad, N., Sunde, R. B., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Stokholm, Jakob & Bisgaard, H., 2023, In: Journal of Infectious Diseases. 227, 3, p. 448–456 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Supplementation with inulin-type fructans affects gut microbiota and attenuates some of the cardiometabolic benefits of a plant-based diet in individuals with overweight or obesity
Aldubayan, Mona Adnan Y, Mao, Xiaotian, Laursen, M. F., Pigsborg, Kristina, Christensen, Lars, Roager, Henrik Munch, Nielsen, Dennis Sandris, Hjorth, Mads Fiil & Magkos, Faidon, 2023, In: Frontiers in Nutrition. 10, 13 p., 1108088.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The airway microbiota of neonates colonized with asthma-associated pathogenic bacteria
Thorsen, Jonathan Jan Ilve, Li, Xuan Ji, Peng, Shuang, Sunde, R. B., Shah, S. A., Bhattacharyya, M., Poulsen, C. S., Poulsen, Christina Egeø, Leal Rodriguez, C., Widdowson, Michael Lawrence, Neumann, A. U., Trivedi, Urvish, Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Nature Communications. 14, 12 p., 6668.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The impact of bacterial exposure in early life on lung surfactant gene expression, function and respiratory rate in germ-free mice
Barfod, Kenneth Klingenberg, Lui, J. C., Hansen, Signe Schmidt Kjølner, Sengupta, S., Zachariassen, L. S. F., Hansen, Axel Kornerup & Sørli, J. B., 2023, In: Frontiers in Microbiomes. 2, 12 p., 1085508.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
The impact of botanical fermented foods on metabolic syndrome and type 2 diabetes: a systematic review of randomised controlled trials
Chan, M., Larsen, Nadja, Baxter, H., Jespersen, Lene, Ekinci, E. I. & Howell, K., 2023, (E-pub ahead of print) In: Nutrition Research Reviews.Research output: Contribution to journal › Review › Research › peer-review
- Published
The impact of storage buffer and storage conditions on fecal samples for bacteriophage infectivity and metavirome analyses
Zhai, Xichuan, Castro-Mejía, J. L., Gobbi, Alex, Aslampaloglou, A., Kot, Witold, Nielsen, Dennis Sandris & Deng, Ling, 2023, In: Microbiome. 11, 12 p., 193.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The infant gut virome is associated with preschool asthma risk independently of bacteria
Rodríguez, C. L., Shah, S. A., Rasmussen, Morten Arendt, Thorsen, J., Boulund, U., Pedersen, C. T., Castro-Mejía, J. L., Poulsen, Christina Egeø, Poulsen, C. S., Deng, Ling, Larsen, Frej Andreas Nøhr, Widdowson, Michael Lawrence, Zhang, Yichang, Sørensen, Søren Johannes, Moineau, S., Petit, M. A., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Nielsen, Dennis Sandris & Stokholm, Jakob, 2023, In: Nature Medicine. 30, p. 138-148 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Unbiased prediction errors for partial least squares regression models: Choosing a representative error estimator for process monitoring
Skou, P. B., Tonolini, Margherita, Eskildsen, C. E., van der Berg, Franciscus Winfried J & Rasmussen, Morten Arendt, 2023, In: Journal of Near Infrared Spectroscopy. 31, 4, p. 186-195Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Used Nasogastric Feeding Tubes from Neonates Contain Infant-Specific Bacterial Profiles
Meinich Juhl, S., Angeliki Krogfelt, K., Kot, Witold, Nielsen, Dennis Sandris & Krych, Lukasz, 2023, In: Microorganisms. 11, 6, 11 p., 1365.Research output: Contribution to journal › Journal article › Research › peer-review
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A possible link between food and mood: dietary impact on gut microbiota and behavior in BALB/c mice
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2-heptyl-formononetin increases cholesterol and induces hepatic steatosis in mice
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Quantitatively different, yet qualitatively alike: a meta-analysis of the mouse core gut microbiome with a view towards the human gut microbiome
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16S rRNA gene sequencing of non-lactic acid bacteria cultures from lait caillé in Burkina Faso
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