Microbiology and Fermentation

  1. 2018
  2. Published
  3. Published

    Cheese brines from Danish dairies reveal a complex microbiota comprising several halotolerant bacteria and yeasts

    Haastrup, M. K., Johansen, Pernille Greve, Malskær, A. H., Castro Mejia, Josue Leonardo, Kot, W., Krych, Lukasz, Arneborg, Nils & Jespersen, Lene, 2018, In : International Journal of Food Microbiology. 285, p. 173-187 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published
  5. Published

    CoMiniGut - a small volume in vitro colon model for the screening of gut microbial fermentation processes

    Wiese, M., Khakimov, Bekzod, Nielsen, Sebastian, Sørensen, H., van der Berg, Franciscus Winfried J & Nielsen, Dennis Sandris, 2018, In : PeerJ. 6, 22 p., e4268.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Comparison of oxidative stress response and biofilm formation of Listeria monocytogenes serotypes 4b and 1/2a

    Huang, Y., Morvay, A. A., Shi, X., Sou, Y., Shi, C. & Knøchel, Susanne, 2018, In : Food Control. 85, p. 416-422 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Could the addition of sugars boost bacterial interaction and accelerate cheese ripening time?

    Møller, Cleide Oliveira de Almeida, Siegumfeldt, Henrik, Czárán, T. L., Christensen, B. & Rattray, Fergal Patrick, 2018, p. 61. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  8. Published

    Effect of GAPDH-derived antimicrobial peptides on sensitive yeasts cells: membrane permeability, intracellular pH and H+-influx/-efflux rates

    Branco, P., Albergaria, H., Arneborg, Nils & Prista, C., 2018, In : FEMS Yeast Research. 18, 3, p. 1-8 foy030.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Effect of the dietary polyacetylenes falcarinol and falcarindiol on the gut microbiota composition in a rat model of colorectal cancer

    Kobaek-Larsen, M., Nielsen, Dennis Sandris, Kot, W., Krych, Lukasz, Christensen, L. P. & Baatrup, G., 2018, In : BMC Research Notes. 11, p. 1-6 411.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Exploring the microbiota from cheese brines at Danish dairies by culture dependent and independent techniques

    Johansen, Pernille Greve, Malskær, A. H., Haastrup, M. K., Castro Mejia, Josue Leonardo, Kot, W., Krych, Lukasz, Arneborg, Nils & Arneborg, Nils, 2018.

    Research output: Contribution to conferencePosterResearchpeer-review

  11. Published

    Extraction and purification of viruses from fecal samples for metagenome and morphology analyses

    Castro Mejia, Josue Leonardo, Deng, Ling, Vogensen, Finn Kvist, Reyes, A. & Nielsen, Dennis Sandris, 2018, The Human Virome: Methods and Protocols. Moya, A. & Brocal, V. P. (eds.). Humana Press, p. 49-57 9 p. (Methods in Molecular Biology, Vol. 1838).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  12. Published

    Gut microbiota recovery and immune response in ampicillin-treated mice

    Castro Mejia, Josue Leonardo, Jakesevic, M., Fabricius, N. F., Krych, Lukasz, Nielsen, Dennis Sandris, Kot, W., Bendtsen, K. M. B., Vogensen, Finn Kvist, Hansen, Camilla Hartmann Friis & Hansen, Axel Kornerup, 2018, In : Research in Veterinary Science. 118, p. 357-364 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Have you tried spermine? A rapid and cost-effective method to eliminate dextran sodium sulfate inhibition of PCR and RT-PCR

    Krych, Lukasz, Kot, W., Bendtsen, K. M. B., Hansen, Axel Kornerup, Vogensen, Finn Kvist & Nielsen, Dennis Sandris, 2018, In : Journal of Microbiological Methods. 144, p. 1-7 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Influenza A Virus Infection Alters Gut Microbiota Composition in Juvenile Mice

    Fuglsang, E., Krych, Lukasz, Nielsen, Dennis Sandris, Frøkiær, Hanne & Reading, P. C., 2018, In : Journal of Infectious Diseases & Travel Medicine. 2, 3, 10 p., 000118.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Ingestion of an Inulin-Enriched Pork Sausage Product Positively Modulates the Gut Microbiome and Metabolome of Healthy Rats

    Thøgersen, R., Castro Mejia, Josue Leonardo, Sundekilde, U. K., Hansen, L. H., Hansen, Axel Kornerup, Nielsen, Dennis Sandris & Bertram, H. C., 2018, In : Molecular Nutrition and Food Research. 62, 19, p. 1-10 1800608.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Investigation of the bacteriophage community in induced lysates of undefined mesophilic mixed-strain DL-cultures using classical and metagenomic approaches

    Muhammed, Musemma Kedir, Olsen, M. L., Kot, Witold, Neve, H., Castro Mejia, Josue Leonardo, Janzen, T., Hansen, L. H., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2018, In : International Journal of Food Microbiology. 272, p. 61-72 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Lacto-fermented sauerkraut improves symptoms in IBS patients independent of product pasteurisation - a pilot study

    Nielsen, E. S., Garnås, E., Jensen, K. J., Hansen, L. H., Olsen, P. S., Ritz, Christian, Krych, Lukasz & Nielsen, Dennis Sandris, 2018, In : Food & Function. 9, 10, p. 5323-5335 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Long-term Western diet fed apolipoprotein E-deficient rats exhibit only modest early atherosclerotic characteristics

    Rune, I., Rolin, B., Lykkesfeldt, Jens, Nielsen, Dennis Sandris, Krych, Lukasz, Kanter, J. E., Bornfeldt, K. E., Kihl, P., Buschard, Karsten Stig, Josefsen, K., Fels, J. J., Mortensen, A., Christoffersen, B., Kirk, R. K. & Hansen, Axel Kornerup, 2018, In : Scientific Reports. 8, 1, 12 p., 5416.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Low glycaemic index foods from wild barley and amylose-only barley lines

    Sagnelli, D., Chessa, S., Mandalari, G., Di Martino, M., Sorndech, W., Mamone, G., Vincze, E., Buillon, G., Nielsen, Dennis Sandris, Wiese, M., Blennow, Andreas & Hebelstrup, K. H., 2018, In : Journal of Functional Foods. 40, p. 408-416 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Metabolic footprint analysis of metabolites that discriminate single and mixed yeast cultures at two key time-points during mixed culture alcoholic fermentations

    Peng, C., Viana, T. M. L., Petersen, Mikael Agerlin, Larsen, F. H. & Arneborg, Nils, 2018, In : Metabolomics. 14, 7, 12 p., 93.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Metabolomics and proteomics insights into yeast physiological dynamics during single and mixed alcoholic fermentations

    Peng, C., 2018, Department of Food Science, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  22. Published

    Modelling the influence of metabolite diffusion on non-starter lactic acid bacteria growth in ripening Cheddar cheese

    Czárán, T., Rattray, Fergal Patrick, Møller, Cleide Oliveira de Almeida & Christensen, B. B., 2018, In : International Dairy Journal. 80, p. 35-45 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Modulation of gut microbiota from obese individuals by in vitro fermentation of citrus pectin in combination with Bifidobacterium longum BB-46

    Bianchi, F., Larsen, N., de Mello Tieghi, T., Tallarico Adorno, M. A., Kot, W., Saad, S. M. I., Jespersen, Lene & Sivieri, K., 2018, In : Applied Microbiology and Biotechnology. 102, 20, p. 8827-8840 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Neonatal gut and immune maturation is determined more by postnatal age than by postconceptional age in moderately preterm pigs

    Ren, S., Hui, Yan, Obelitz-Ryom, K., Brandt, A. B., Kot, W., Nielsen, Dennis Sandris, Thymann, Thomas, Sangild, Per Torp & Nguyen, Duc Ninh, 2018, In : American Journal of Physiology: Gastrointestinal and Liver Physiology. 315, 5, p. G855-G867

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Occurrence of lactic acid bacteria and yeasts at species and strain level during spontaneous fermentation of mawè, a cereal dough produced in West Africa

    Houngbédji, M., Johansen, Pernille Greve, Padonou, S. W., Akissoe, N., Arneborg, Nils, Nielsen, Dennis Sandris, Hounhouigan, D. J. & Jespersen, Lene, 2018, In : Food Microbiology. 76, p. 267-278 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Oral insulin does not alter gut microbiota composition of NOD mice

    Kihl, P., Krych, Lukasz, Buschard, Karsten Stig, Wesley, J. D., Kot, W., Hansen, Axel Kornerup, Nielsen, Dennis Sandris & von Herrath, M. G., 2018, In : Diabetes/Metabolism Research and Reviews. 34, 6, 9 p., e3010.

    Research output: Contribution to journalJournal articleResearchpeer-review

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